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NECEvent2014_5_8_Eggerthella_1_3_5FAA-rel_64_6

NECEvent2014_5_8_Eggerthella_64_6
In projects: NECEvent2014_5_8

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

fragments of PC.diff merged with Eggerthella as in other (ESOM supported)

Displaying items 151-200 of 1015 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_6433 175_008_scaffold_6433
Species: Eggerthella lenta (100%)
2 1056 bp 62.78 5.11 78.13
NECEvent2014_5_8_scaffold_3522 175_008_scaffold_3522
Species: Eggerthella sp. HGA1 (66.67%)
3 2284 bp 65.37 4.79 78.15
NECEvent2014_5_8_scaffold_3629 175_008_scaffold_3629
Species: Eggerthella lenta (50%)
4 2199 bp 63.85 4.91 78.31
NECEvent2014_5_8_scaffold_4311 175_008_scaffold_4311
Genus: Eggerthella (66.67%)
3 1789 bp 61.93 4.53 78.31
NECEvent2014_5_8_scaffold_688 175_008_scaffold_688
Species: Eggerthella lenta (58.33%)
12 12072 bp 64.16 6.54 78.38
NECEvent2014_5_8_scaffold_2775 175_008_scaffold_2775
Species: Eggerthella lenta (66.67%)
3 3008 bp 67.25 7.38 78.39
NECEvent2014_5_8_scaffold_4391 175_008_scaffold_4391
Species: Eggerthella sp. HGA1 (100%)
2 1751 bp 62.25 6.77 78.47
NECEvent2014_5_8_scaffold_5210 175_008_scaffold_5210
Species: Eggerthella lenta (100%)
1 1412 bp 63.60 6.80 78.61
NECEvent2014_5_8_scaffold_1558 175_008_scaffold_1558
Species: Eggerthella lenta (50%)
4 5466 bp 63.57 7.30 78.65
NECEvent2014_5_8_scaffold_1206 175_008_scaffold_1206
Species: Eggerthella sp. HGA1 (57.14%)
7 7082 bp 64.71 5.30 78.75
NECEvent2014_5_8_scaffold_4286 175_008_scaffold_4286
Species: Eggerthella sp. HGA1 (66.67%)
3 1801 bp 61.91 5.00 78.79
NECEvent2014_5_8_scaffold_4671 175_008_scaffold_4671
Species: Eggerthella lenta (50%)
2 1633 bp 54.13 7.16 78.81
NECEvent2014_5_8_scaffold_5297 175_008_scaffold_5297
Species: Eggerthella sp. HGA1 (75%)
4 1375 bp 62.76 4.36 78.84
NECEvent2014_5_8_scaffold_2272 175_008_scaffold_2272
Species: Eggerthella lenta (66.67%)
3 3747 bp 66.64 5.48 78.86
NECEvent2014_5_8_scaffold_3640 175_008_scaffold_3640
Species: Eggerthella sp. HGA1 (66.67%)
3 2194 bp 62.31 6.15 78.90
NECEvent2014_5_8_scaffold_1703 175_008_scaffold_1703
Species: Eggerthella lenta (83.33%)
6 4969 bp 60.98 7.37 78.91
NECEvent2014_5_8_scaffold_3167 175_008_scaffold_3167
Species: Peptoclostridium difficile (50%)
2 2583 bp 59.54 4.94 78.98
NECEvent2014_5_8_scaffold_3337 175_008_scaffold_3337
Phylum: Actinobacteria (66.67%)
3 2418 bp 61.08 6.20 79.03
NECEvent2014_5_8_scaffold_6172 175_008_scaffold_6172
Species: Eggerthella sp. HGA1 (66.67%)
3 1115 bp 62.87 6.46 79.10
NECEvent2014_5_8_scaffold_4235 175_008_scaffold_4235
Species: Eggerthella sp. HGA1 (100%)
3 1822 bp 65.20 5.85 79.20
NECEvent2014_5_8_scaffold_4273 175_008_scaffold_4273
Species: Eggerthella sp. HGA1 (100%)
1 1803 bp 63.06 4.99 79.20
NECEvent2014_5_8_scaffold_5054 175_008_scaffold_5054
Species: Eggerthella sp. HGA1 (100%)
2 1472 bp 63.45 7.44 79.28
NECEvent2014_5_8_scaffold_5138 175_008_scaffold_5138
Species: Eggerthella sp. HGA1 (100%)
2 1441 bp 63.15 7.49 79.32
NECEvent2014_5_8_scaffold_2719 175_008_scaffold_2719
Species: Eggerthella sp. HGA1 (80%)
5 3071 bp 57.60 5.28 79.32
NECEvent2014_5_8_scaffold_4151 175_008_scaffold_4151
Species: Peptoclostridium difficile (50%)
2 1869 bp 68.86 4.98 79.45
NECEvent2014_5_8_scaffold_4542 175_008_scaffold_4542
Species: Eggerthella lenta (66.67%)
3 1680 bp 67.80 5.89 79.46
NECEvent2014_5_8_scaffold_1786 175_008_scaffold_1786
Species: Eggerthella sp. HGA1 (66.67%)
3 4763 bp 65.53 6.83 79.49
NECEvent2014_5_8_scaffold_4916 175_008_scaffold_4916
Species: Eggerthella sp. HGA1 (50%)
2 1524 bp 63.65 5.61 79.53
NECEvent2014_5_8_scaffold_2624 175_008_scaffold_2624
Genus: Eggerthella (66.67%)
3 3162 bp 60.18 7.26 79.60
NECEvent2014_5_8_scaffold_4670 175_008_scaffold_4670
Species: Eggerthella sp. HGA1 (50%)
2 1634 bp 69.03 6.70 79.68
NECEvent2014_5_8_scaffold_2350 175_008_scaffold_2350
Species: Eggerthella sp. HGA1 (80%)
5 3618 bp 60.31 6.09 79.68
NECEvent2014_5_8_scaffold_4038 175_008_scaffold_4038
Species: Eggerthella sp. HGA1 (66.67%)
3 1937 bp 65.41 5.34 79.76
NECEvent2014_5_8_scaffold_3469 175_008_scaffold_3469
Species: Eggerthella sp. HGA1 (50%)
2 2313 bp 66.32 4.93 79.77
NECEvent2014_5_8_scaffold_4108 175_008_scaffold_4108
Species: Eggerthella sp. HGA1 (100%)
3 1888 bp 65.20 6.59 79.77
NECEvent2014_5_8_scaffold_2338 175_008_scaffold_2338
Species: Coriobacteriaceae bacterium 68-1-3 (50%)
2 3640 bp 64.78 5.23 79.78
NECEvent2014_5_8_scaffold_2923 175_008_scaffold_2923
Species: Eggerthella lenta (100%)
2 2842 bp 60.34 5.65 79.91
NECEvent2014_5_8_scaffold_1875 175_008_scaffold_1875
Species: Eggerthella sp. HGA1 (83.33%)
6 4540 bp 64.03 6.57 79.96
NECEvent2014_5_8_scaffold_2029 175_008_scaffold_2029
Species: Eggerthella lenta (75%)
4 4206 bp 65.98 6.03 79.96
NECEvent2014_5_8_scaffold_5640 175_008_scaffold_5640
Species: Eggerthella lenta (100%)
2 1271 bp 63.02 5.19 80.02
NECEvent2014_5_8_scaffold_6562 175_008_scaffold_6562
Species: Eggerthella lenta (50%)
2 1030 bp 66.12 3.93 80.10
NECEvent2014_5_8_scaffold_2067 175_008_scaffold_2067
Species: Eggerthella lenta (50%)
4 4129 bp 61.54 6.54 80.14
NECEvent2014_5_8_scaffold_2822 175_008_scaffold_2822
Species: Eggerthella lenta (100%)
3 2957 bp 52.52 6.59 80.25
NECEvent2014_5_8_scaffold_4872 175_008_scaffold_4872
Species: Eggerthella lenta (50%)
2 1545 bp 64.27 7.67 80.39
NECEvent2014_5_8_scaffold_5676 175_008_scaffold_5676
Species: Eggerthella lenta (100%)
2 1257 bp 65.08 4.30 80.43
NECEvent2014_5_8_scaffold_2689 175_008_scaffold_2689
Species: Eggerthella sp. HGA1 (50%)
2 3103 bp 65.87 4.45 80.44
NECEvent2014_5_8_scaffold_4586 175_008_scaffold_4586
Species: Eggerthella lenta (50%)
2 1662 bp 67.51 4.51 80.51
NECEvent2014_5_8_scaffold_6012 175_008_scaffold_6012
Species: Eggerthella sp. HGA1 (100%)
2 1158 bp 64.25 5.70 80.57
NECEvent2014_5_8_scaffold_2873 175_008_scaffold_2873
Species: Eggerthella sp. HGA1 (100%)
3 2905 bp 60.83 7.54 80.65
NECEvent2014_5_8_scaffold_2076 175_008_scaffold_2076
Species: Eggerthella sp. HGA1 (75%)
4 4116 bp 65.57 5.32 80.76
NECEvent2014_5_8_scaffold_1804 175_008_scaffold_1804
Species: Eggerthella lenta (75%)
4 4723 bp 64.60 5.15 80.80
Displaying items 151-200 of 1015 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.