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NECEvent2014_5_8_scaffold_570_30

Organism: NECEvent2014_5_8_Escherichia_coli_51_170_partial

partial RP 24 / 55 MC: 4 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(32166..32513)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 228
  • Evalue 4.30e-57
sdhD; succinate dehydrogenase cytochrome b556 small subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 228
  • Evalue 1.20e-57
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EHW24027.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 228
  • Evalue 6.10e-57

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGGTAAGCAACGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGTTTCTTCGCCTCTGCGTTCACCAAAGTGTTCACCCTGCTGGCGCTGTTTTCTATCTTGATTCATGCCTGGATCGGCATGTGGCAGGTGTTGACCGACTACGTTAAACCGCTGGCCTTGCGCCTGATGCTGCAACTGGTGATTGTCGTTGCACTGGTGGTTTACGTGATTTATGGATTCGTTGTGGTGTGGGGTGTGTGA
PROTEIN sequence
Length: 116
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV*