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NECEvent2014_5_8_scaffold_575_21

Organism: NECEvent2014_5_8_Escherichia_coli_51_170_partial

partial RP 24 / 55 MC: 4 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(17698..18591)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator YnfL n=100 Tax=Escherichia coli RepID=D6IQ76_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 585
  • Evalue 3.60e-164
  • rbh
ynfL; putative DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 585
  • Evalue 1.00e-164
LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ70843.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 585
  • Evalue 5.00e-164

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAATATTGAACTTCGTCATCTGCGTTACTTTGTTGCGGTTGCAGAAGAGCTGCATTTCGGGCGCGCCGCTGCCCGCCTGAATATTTCGCAACCACCGCTAAGTCAACAGATTCAGGCGCTGGAGCAACAAATTGGTGCCCGACTGCTGGCACGGACCAATCGCAGTGTATTGCTGACGGCAGCAGGAAAACAGTTTCTTGTAGATAGTCGGCAAATCTTGTCTATGGTGGATGATGCTGCCGCTCGCGCTGAAAGGCTGCATCAGGGCGAAGCGGGGGAGTTGCGCATTGGTTTTACTTCGTCCGCTCCTTTTATTCGGGCGGTGTCCGATACGTTATCGCTGTTTCGCCGTGATTATCCCGATGTCCATTTACAAACCCGCGAAATGAACACTCGCGAGCAAATCGCTCCGCTCATTGAAGGAACGCTGGATATGGGATTGCTGCGTAACACAGCGTTACCGGAGACGCTTGAACACGCAGTCATCGTCCATGAACCGCTTATGGCGATGATCCCGCACGATCATCCCCTGGCAAATAACCCGAGTGTAACGCTGGCTGAACTGGCGAAAGAACCCTTTGTCTTTTTTGATCCGCACGTAGGGACAGGGCTGTATGACGATATTCTCGGGCTGATGCGACGTTACAATTTGACGCCCGTCATCACTCAGGAGGTGGGTGAGGCAATGACCATCATCGGTCTGGTTTCCGCTGGTCTGGGTGTTTCAATTTTGCCTGCGTCATTTAAACGTGTTCAGCTCAACGAAATGCGCTGGGTGCCGATTGCTGAAGAGGATGCGGTTTCTGAAATGTGGTTGGTCTGGCCGAAACACCATGAACAAAGTCCGGCTGCGCGTAACTTTCGTATTCATCTGCTGAATGCTCTCAGGTGA
PROTEIN sequence
Length: 298
MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAAGKQFLVDSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEHAVIVHEPLMAMIPHDHPLANNPSVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYNLTPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR*