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NECEvent2014_5_8_Enterobacteriales_53_56_partial

NECEvent2014_5_8_Enterobacteriales_53_72
In projects: NECEvent2014_5_8

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_5_8_UNK

Properties

Avg. coverage: 71.80 Longest contig: 378.08 Kbp Bin length: 5.46 Mbp GC content: 53.25 %
Contigs count: 121 Features count: 5243 rRNAs count: 0 tRNAs count: 50

Genome completeness

partial RP 18 / 55 MC: 2 BSCG 14 / 51 ASCG 10 / 38 MC: 2
Displaying items 1-50 of 121 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_8_scaffold_5 175_008_scaffold_5
Order: Enterobacteriales (94.25%)
348 328752 bp 52.25 71.60 88.38
NECEvent2014_5_8_scaffold_11 175_008_scaffold_11
Order: Enterobacteriales (95.6%)
341 378076 bp 54.19 75.29 89.81
NECEvent2014_5_8_scaffold_4 175_008_scaffold_4
Order: Enterobacteriales (93.41%)
334 354883 bp 53.18 65.08 87.60
NECEvent2014_5_8_scaffold_1 175_008_scaffold_1
Order: Enterobacteriales (96.33%)
327 363135 bp 53.63 66.09 89.52
NECEvent2014_5_8_scaffold_8 175_008_scaffold_8
Order: Enterobacteriales (94.92%)
236 236136 bp 52.68 70.43 90.44
NECEvent2014_5_8_scaffold_14 175_008_scaffold_14
Order: Enterobacteriales (94.03%)
201 215140 bp 52.77 74.03 87.59
NECEvent2014_5_8_scaffold_26 175_008_scaffold_26
Order: Enterobacteriales (95.6%)
182 187711 bp 54.79 70.97 90.38
NECEvent2014_5_8_scaffold_41 175_008_scaffold_41
Order: Enterobacteriales (96.15%)
182 193416 bp 53.39 74.07 88.32
NECEvent2014_5_8_scaffold_10 175_008_scaffold_10
Order: Enterobacteriales (99.42%)
171 190169 bp 53.81 73.00 91.62
NECEvent2014_5_8_scaffold_35 175_008_scaffold_35
Genus: Enterobacter (53.22%)
171 190829 bp 54.58 68.79 90.64
NECEvent2014_5_8_scaffold_75 175_008_scaffold_75
Order: Enterobacteriales (99.34%)
151 174033 bp 52.98 76.37 90.63
NECEvent2014_5_8_scaffold_23 175_008_scaffold_23
Order: Enterobacteriales (94.96%)
139 135440 bp 52.31 68.35 84.70
NECEvent2014_5_8_scaffold_36 175_008_scaffold_36
Order: Enterobacteriales (97.64%)
127 146331 bp 52.53 77.05 86.90
NECEvent2014_5_8_scaffold_48 175_008_scaffold_48
Order: Enterobacteriales (94.44%)
126 144443 bp 53.43 73.44 88.86
NECEvent2014_5_8_scaffold_18 175_008_scaffold_18
Order: Enterobacteriales (97.5%)
120 120366 bp 53.97 76.16 90.41
NECEvent2014_5_8_scaffold_21 175_008_scaffold_21
Order: Enterobacteriales (94.87%)
117 124000 bp 53.94 76.83 88.10
NECEvent2014_5_8_scaffold_57 175_008_scaffold_57
Order: Enterobacteriales (89.66%)
116 117787 bp 53.00 79.21 88.99
NECEvent2014_5_8_scaffold_164 175_008_scaffold_164
Order: Enterobacteriales (92.93%)
99 101675 bp 54.15 74.29 87.76
NECEvent2014_5_8_scaffold_27 175_008_scaffold_27
Order: Enterobacteriales (96.94%)
98 115215 bp 53.73 71.47 90.98
NECEvent2014_5_8_scaffold_42 175_008_scaffold_42
Order: Enterobacteriales (92.63%)
95 88862 bp 53.29 66.55 87.51
NECEvent2014_5_8_scaffold_46 175_008_scaffold_46
Order: Enterobacteriales (84.09%)
88 82558 bp 51.99 67.53 86.31
NECEvent2014_5_8_scaffold_38 175_008_scaffold_38
Order: Enterobacteriales (95.4%)
87 92476 bp 51.30 74.54 85.41
NECEvent2014_5_8_scaffold_55 175_008_scaffold_55
Order: Enterobacteriales (96.34%)
82 97070 bp 53.04 73.57 87.42
NECEvent2014_5_8_scaffold_53 175_008_scaffold_53
Order: Enterobacteriales (97.3%)
74 77745 bp 52.64 68.54 88.19
NECEvent2014_5_8_scaffold_66 175_008_scaffold_66
Order: Enterobacteriales (95.83%)
72 71445 bp 53.22 69.50 88.46
NECEvent2014_5_8_scaffold_67 175_008_scaffold_67
Order: Enterobacteriales (86.96%)
69 70415 bp 54.20 74.69 88.02
NECEvent2014_5_8_scaffold_63 175_008_scaffold_63
Order: Enterobacteriales (94.12%)
68 72367 bp 53.91 70.01 89.04
NECEvent2014_5_8_scaffold_97 175_008_scaffold_97
Order: Enterobacteriales (94.12%)
68 70838 bp 54.46 77.71 91.78
NECEvent2014_5_8_scaffold_218 175_008_scaffold_218
Order: Enterobacteriales (93.85%)
65 64274 bp 54.16 75.72 90.58
NECEvent2014_5_8_scaffold_91 175_008_scaffold_91
Order: Enterobacteriales (98.41%)
63 57578 bp 52.37 71.80 89.06
NECEvent2014_5_8_scaffold_194 175_008_scaffold_194
Order: Enterobacteriales (95.24%)
63 54977 bp 51.02 79.75 85.18
NECEvent2014_5_8_scaffold_126 175_008_scaffold_126
Order: Enterobacteriales (96.49%)
57 47560 bp 50.48 75.23 90.15
NECEvent2014_5_8_scaffold_204 175_008_scaffold_204
Order: Enterobacteriales (86.79%)
53 53315 bp 53.35 73.58 89.52
NECEvent2014_5_8_scaffold_159 175_008_scaffold_159
Order: Enterobacteriales (100%)
42 41000 bp 54.19 77.97 91.88
NECEvent2014_5_8_scaffold_186 175_008_scaffold_186
Order: Enterobacteriales (100%)
38 36482 bp 52.70 73.42 90.69
NECEvent2014_5_8_scaffold_262 175_008_scaffold_262
Order: Enterobacteriales (100%)
37 45227 bp 53.91 77.79 92.47
NECEvent2014_5_8_scaffold_131 175_008_scaffold_131
Order: Enterobacteriales (90.91%)
33 46299 bp 54.10 70.70 87.35
NECEvent2014_5_8_scaffold_386 175_008_scaffold_386
Order: Enterobacteriales (100%)
30 31027 bp 54.29 74.27 90.43
NECEvent2014_5_8_scaffold_312 175_008_scaffold_312
Genus: Enterobacter (50%)
30 34219 bp 53.07 75.02 88.51
NECEvent2014_5_8_scaffold_199 175_008_scaffold_199
Order: Enterobacteriales (96.43%)
28 34696 bp 54.59 62.41 92.06
NECEvent2014_5_8_scaffold_337 175_008_scaffold_337
Order: Enterobacteriales (100%)
25 23270 bp 53.95 78.48 92.50
NECEvent2014_5_8_scaffold_369 175_008_scaffold_369
Order: Enterobacteriales (95.24%)
21 20797 bp 45.87 80.48 85.83
NECEvent2014_5_8_scaffold_371 175_008_scaffold_371
Order: Enterobacteriales (90.48%)
21 20495 bp 53.03 84.48 91.31
NECEvent2014_5_8_scaffold_435 175_008_scaffold_435
Order: Enterobacteriales (100%)
20 18369 bp 53.32 81.45 90.14
NECEvent2014_5_8_scaffold_590 175_008_scaffold_590
Order: Enterobacteriales (100%)
16 13979 bp 52.94 70.98 92.50
NECEvent2014_5_8_scaffold_765 175_008_scaffold_765
Order: Enterobacteriales (100%)
16 10963 bp 50.68 84.79 92.60
NECEvent2014_5_8_scaffold_573 175_008_scaffold_573
Order: Enterobacteriales (93.33%)
15 16368 bp 49.35 78.89 86.43
NECEvent2014_5_8_scaffold_1454 175_008_scaffold_1454
Genus: Enterobacter (60%)
15 7258 bp 48.87 74.88 85.23
NECEvent2014_5_8_scaffold_1228 175_008_scaffold_1228
Order: Enterobacteriales (86.67%)
15 16003 bp 52.30 86.85 90.11
NECEvent2014_5_8_scaffold_466 175_008_scaffold_466
Order: Enterobacteriales (100%)
15 17190 bp 50.92 81.67 84.97
Displaying items 1-50 of 121 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.