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NECEvent2014_5_8_scaffold_979_2

Organism: NECEvent2014_5_8_Escherichia_coli_49_16_v_partial

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: 2053..2292

Top 3 Functional Annotations

Value Algorithm Source
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Escherichia coli BCE011_MS-01 RepID=N2RPW5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 5.90e-37
pgaA; outer membrane protein PgaA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 1.60e-37
Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EZD89115.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 8.20e-37

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGTATTCAAGTAGCAGAAAAAGGTGCCCGAAAACCAAATGGGCTTTGAAACTTCTTACTGCCGCATTTTTAGCAGCGAGTCCCGCGGCGAAGAGTGCTGTTAATAACGCCTATGATGCATTGATTATTGAAGCTCGCAAGGGTAATACTCAGCCAGCTTTGTCATGGTTTGCACTAAAATCAGCACTCAGCAATAACCAAATTGCTGACTGGTTACAGATTGCCTTATGGGCCGGGTAA
PROTEIN sequence
Length: 80
MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALSWFALKSALSNNQIADWLQIALWAG*