ggKbase home page

NECEvent2014_5_8_scaffold_1012_7

Organism: NECEvent2014_5_8_Escherichia_coli_49_16_v_partial

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(6385..6924)

Top 3 Functional Annotations

Value Algorithm Source
Major type 1 subunit fimbrin FimA n=39 Tax=Escherichia coli RepID=F4LYQ3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 352
  • Evalue 1.80e-94
  • rbh
major type 1 subunit fimbrin FimA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 352
  • Evalue 5.10e-95
Fimbrial protein {ECO:0000313|EMBL:ESA96980.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 352
  • Evalue 2.50e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAAAAAAAGTGTATTGACGGCGTTTATAACTGTGGTATGTGTAACGTCCAGCGTTATGGCTGCTGATGATAATGCTATCACGGATGGCTCAGTAACATTTAATGGTAAAGTTATTGCTCCAGCTTGTACCCTGGTAGCTGCGACGAAAGATTCCGTGGTGACTTTGCCAGATGTTAGTGCCACGAAGTTGCAAACCAATGGTCAGGTTTCTGGCGTGCAAACTGATGTGCCAATTGAATTAAAAGATTGTGATACTACCGTAACAAAAAATGCAACGTTCACCTTTAATGGCACTGCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGGGAAAGCGACTTCAGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAA
PROTEIN sequence
Length: 180
MKKSVLTAFITVVCVTSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKLQTNGQVSGVQTDVPIELKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQMYMNDGTTAITPDTETGNILLQDGDQTLTFKVDYIATGKATSGNVNAVTNFHINYY*