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NECEvent2014_5_8_scaffold_3894_2

Organism: NECEvent2014_5_8_Escherichia_coli_49_16_v_partial

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(178..1776)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=4 Tax=Escherichia coli RepID=D7Y0M4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 532.0
  • Bit_score: 1057
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ELD67439.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 532.0
  • Bit_score: 1057
  • Evalue 0.0
regulator of RNA terminal phosphate cyclase similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 532.0
  • Bit_score: 1055
  • Evalue 0.0
  • rbh

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGCGTAAAACAGTGGCTTTTGGCTTTGTCGGAACAGTGCTGGATTATGCCGGGCGCGGCAGTCAGCGCTGGTCGAAATGGCTTCCGACACTCTGTTTATGCCAGCAAGAATCGTTGGTCATCGATCGACTGGAATTATTGCATGACGCCCGCTCACGCTCGCTATTTGAAACGCTTAAACGCGATATCACCAGCGTTTCGCCAGAAACAGAAGTGGTGAGCGTTGAGATTGAACTGCATAACCCGTGGGATTTCGAAGAGGTTTACGCTTGCCTGCATGATTTCGCCCGTGGTTACGAGTTTCAGCCAGAAAAAGAAGACTATTTAATTCACATTACCACCGGCACCCACGTCGCGCAGATTTGCTGGTTTCTGCTGGCGGAAGCGCGTTACCTGCCCGCCCGGCTGATACAATCTTCACCTCCGCGCAAAAAAGAACAGCCGCGCGGCGCAGGTGAAGTGACGATTATCGATCTCGATTTAAGCCGTTATAACGCCATCGCCAGCCGCTTTGCCGAGGAACGCCAGCAAACGCTTGATTTTCTTAAGTCCGGCATTGCCACGCGTAACCCCCACTTCAACCGCATGATTGAGCAGATCGAAAAAGTGGCGATCAAATCCCGCGCGCCGATTCTGCTTAACGGTCCAACCGGCGCGGGCAAGTCATTTCTGGCGCGACGCATCTTCGAGTTAAAACAGGCGCGGCATCAGTTTAGCGGCGCGTTTGTGGAAGTGAACTGCGCCACCCTGCGCGGCGATACCGCCATGTCGACGCTGTTTGGTCATGTAAAAGGCGCGTTTACCGGGGCGCGGGAATCTCGTGAAGGTTTATTACGCAGCGCCAACGGCGGAATGTTGTTTCTTGATGAGATTGGCGAACTGGGCGCAGACGAACAAGCAATGCTGCTAAAAGCCATTGAAGAGAAAACCTTTTACCCGTTTGGCAGCGATCGCCAGGTGAGCAGTGATTTTCAGCTTATCGCCGGAACGGTGCGCGATTTGCGCCAGCTGGTTGCCGAAGGCAAATTCCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGGCTACGCCAGCGCCAGGAAGATATTGAACCTAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACCGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGCGTGCCTGGCTGGCCTTTGCAACATCTCCTCAGGCGACATGGCGCGGTAACTTTCGCGAGCTTTCTGCCAGCGTCACGCGGATGGCAACCTTTGCCACTAGCGGACGCATCACTCTGGACGTGGTTGAAGATGAGATAAACCGTCTGCGCTATAACTGGCAGGAGAGCCGTCCCTCCGCGCTTACGCAACTGCTGGGCGCAGAGGCAGAAAACATCGATCTCTTCGACCGTATGCAACTGGAACACGTTATCGCTATCTGCCGCCAGGCAAAGTCGCTTTCTGCTGCCGGACGACAGCTTTTTGATGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACCTGGGAAGCATTGCAGGATCAGCACAGCTCCAGTTGA
PROTEIN sequence
Length: 533
MRKTVAFGFVGTVLDYAGRGSQRWSKWLPTLCLCQQESLVIDRLELLHDARSRSLFETLKRDITSVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQESRPSALTQLLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEALQDQHSSS*