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NECEvent2014_5_8_scaffold_4524_4

Organism: NECEvent2014_5_8_Escherichia_coli_45_16_hint

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 1308..1598

Top 3 Functional Annotations

Value Algorithm Source
EpaO n=1 Tax=Escherichia coli RepID=Q3SBB5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 198
  • Evalue 4.00e-48
type III secretion system protein SpaO similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 198
  • Evalue 1.10e-48
Type III secretion apparatus protein, YscQ/HrcQ family {ECO:0000313|EMBL:EMU68230.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 198
  • Evalue 5.60e-48

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGTTCGGTCTGAGGAAAGTAAATCGAAACACTCATATGTTTGAAACCACTTTTCAAAATTGGAAAGAAAATGGCGAAGATGTTACATTATTAATGCCCGAATTTAGTGCTAAATGGCTACCGATAGCAGAAGAGAGTGGCAGCTGGTCTGGATGGGTATTGCTTGGAGAAATATTTCCCTTAATTTCATCTGAGCTCGCTGGGATGGCTTTAATGCCAGAAACGGAAAGGTTAATAGGGGAATGGCTCAGTTTATCCAGTTCCCCGTTAAATCTAAAGCATCCTGGGTAA
PROTEIN sequence
Length: 97
MFGLRKVNRNTHMFETTFQNWKENGEDVTLLMPEFSAKWLPIAEESGSWSGWVLLGEIFPLISSELAGMALMPETERLIGEWLSLSSSPLNLKHPG*