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NECEvent2014_5_8_scaffold_271_11

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(11049..12824)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T0B0_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 591.0
  • Bit_score: 1161
  • Evalue 0.0
  • rbh
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDU36800.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 591.0
  • Bit_score: 1160
  • Evalue 0.0
putative sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 591.0
  • Bit_score: 1145
  • Evalue 0.0

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1776
GTGTCTTTAAATAGTATAAAGGGCTCTGTTCAAGAGGTGGCGGAAGCTATAGCCGCAGTTCTTAAGGTGGATGTTACTATAATTGATAAAAATTTTAATAGAATTGCCGCCACCGGTAAGTATAAAAAATTTATAGGAAATAAAATACCAGGAAAATGTTTGTTTGAATTAGTTATAAAAGAGAAAAAAACCAATCATATAAAAAGATATTTAAAAGATAATGAAAAGAAGATAAATCCATCTGTATGTGAAAGCTGTGAGGCGAAGGAGAGATGTACAGAATATGCAACCATAGGTTACCCTATAATTATGGAGAATGAAGTAATAGGAGTAATTGGTATAAATATTTTTAATGAAAAGCAACTTAATATAATATCTGAAGAATTTGATTCTATGATAACATTTTTAAATAGATTAAGTACATTACTTGTAGGAAATATTATTTATTATGATACTATAAAAAAATTACAAATTCAGACTGAAGAAACCAATCATATAATAGATAGTTTAAGCCACGGTATAATGTGTGTAGATAACAATGGAATTTTAAAATATATTAATCATAAGGGAAAAAAACTATTAGATATTAAAGAGAAGTCATTAGTAAACACTAATATTAAAGATACAATATCAAACTTTAATATTAAACTTTTAAGTAAAGAATATAAGGGTAAAAGAATAAGTATCCATGGTAAAAATGAAAGTTTTTTAATTAAAAGTAGTCCCATTATATTCAAAGGTGAAAGGGTAAGTAATATTATAGAATTTAATAAAAAAATTGATGAAGTTCAAGCTGCCTATAAGCTTTTTGCTAGTAGTAAAATTATAAAATTTGAAGATATAATGGGTAGTAGTAATAATATAAAAAATGTAAAGCTGATTGCTAAAAATATTGCTAGAACTGATTCAACTGTGTTATTAAGAGGAGAAAGTGGTACAGGAAAAGAACTTTTTGCAAGAGCTATACATTTTGAAAGCCAAAGGTGTGATGCTCCTTTTATAGCTGTTAATTGTGCTTCTATTCCAGATAATTTATTAGAAAGTGAATTTTTTGGATATGAAGGAGGGGCTTTTTCGGGGGCAAAAAGGGAAGGTCAAATGGGGAAATTTGAACTTGCCAATGGAGGAACTATATTTTTAGATGAAATAGGGGATTTACCTTTGCATCTTCAACCTAAAATATTAAGAGTACTTCAAGAACAAAGTTTTACTAAAATTGGTGGTAAAGAAGAAATATGTGTAGATGTTAGAATAATAGCAGCTACCAATAGAGAACTTGAAACTATGGTTAAACATGGACAATTTAGACAGGATTTATATTATAGATTAAATGTAATACCTATATATTTACCTAGTCTTAAAGATAGAGGGGAAGATATAATATTACTTAGTGAATATCTTATGGATAAATTTTGCGAAAGATCTAATCTAAAGATTAAACAGCTTTCAAAGGAAGTAAAGGATAGTTTTAAAAAGTATTCTTGGGCTGGAAACATAAGAGAACTAGAAAATGTAATAGAATATATAGTAAATACCACAAAGGAAAATATAATATATAATGAACATTTACCAAAATCCTTTAAAATATCTAAAGAAGATGAAAAAAGTAATAAAAGTTTACAGGATAGACTTTATGAGTATGAAAAAAATTTATTAATATCAATGATGGAGGAATATGGTGAAGATGGAAAAGGGAAAGAGAGAATTGCAAAAGAACTAGAGATTAATTTATCCACCCTTTACAGAAAATTAAATAAATATAATTTGCAAAAGTGA
PROTEIN sequence
Length: 592
VSLNSIKGSVQEVAEAIAAVLKVDVTIIDKNFNRIAATGKYKKFIGNKIPGKCLFELVIKEKKTNHIKRYLKDNEKKINPSVCESCEAKERCTEYATIGYPIIMENEVIGVIGINIFNEKQLNIISEEFDSMITFLNRLSTLLVGNIIYYDTIKKLQIQTEETNHIIDSLSHGIMCVDNNGILKYINHKGKKLLDIKEKSLVNTNIKDTISNFNIKLLSKEYKGKRISIHGKNESFLIKSSPIIFKGERVSNIIEFNKKIDEVQAAYKLFASSKIIKFEDIMGSSNNIKNVKLIAKNIARTDSTVLLRGESGTGKELFARAIHFESQRCDAPFIAVNCASIPDNLLESEFFGYEGGAFSGAKREGQMGKFELANGGTIFLDEIGDLPLHLQPKILRVLQEQSFTKIGGKEEICVDVRIIAATNRELETMVKHGQFRQDLYYRLNVIPIYLPSLKDRGEDIILLSEYLMDKFCERSNLKIKQLSKEVKDSFKKYSWAGNIRELENVIEYIVNTTKENIIYNEHLPKSFKISKEDEKSNKSLQDRLYEYEKNLLISMMEEYGEDGKGKERIAKELEINLSTLYRKLNKYNLQK*