ggKbase home page

NECEvent2014_5_8_scaffold_302_7

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 8634..9971

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T4J0_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 445.0
  • Bit_score: 875
  • Evalue 2.00e-251
  • rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 445.0
  • Bit_score: 874
  • Evalue 8.10e-251
RNA modification protein similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 445.0
  • Bit_score: 847
  • Evalue 1.30e-243
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1338
GTGGAAAAAATTAAAGTAGCATTAGTTAGCTTAGGTTGTGATAAAAATAGAATTGATTCAGAACTTATGCTATACAAATTAAATGAAGAAGCAGAACTAGTAAAAGATCCTAAAGAAGCACAGGCAATTATAGTAAATACCTGTGGATTTATTGAAACCGCTAAGGAGGAATCTATAAATACCATTTTACAAATGGCTTCCTATAAAAAAACGCATAATTGCAAAGTGTTAGTAGTTACAGGATGTTTAACTCAAAGATATAAAGGGGAACTTAAAGATCTTATCCCAGAAATGGATATTATGTTAGGGGTAAACGACTATGATAAGTTACTTGAGAGTATAAAAATTTTCTTAAAATCAGGAGAAAAAAGTTTTTATTATAAATATAGTGATATAAAAATAAATGAGGGAAATAGAATATTAACTACTCCAACATACACAGCTTATGTGAGAATAGCAGAAGGATGTAATAATTTTTGTACTTACTGTGCTATACCACGTATAAGAGGAAAGTATAGAAGTAGAAGCAAAGAAAATATATTAAAGGAAGTAGAGAATTTAGCTAAACAAGGAGTTAAAGAAATAATATTAATAGCTCAAGATACAACTATGTATGGAATAGATATATATGGCAAAAAAGTTTTACATGAGCTTTTAAGAGATATTTCTAAAGTTGAAGGTGTAAAGTGGATAAGGTTATTATATTGTTATCCAGAGGAAATAACTAAGGAGCTTATAAAAGAGATTAAAAATAATGATAAGGTATGTAAATATTTAGATCTACCTATACAGCAGATAAGCAATTCCGTTTTAAAAAGAATGGGAAGGAAAACTACAAAGGAAACTATTATAAACATAATAAAAGAATTAAGAAAAGAAATAGAAGGTATTACCTTGAGAACTTCACTAATAGTAGGATTCCCTGGGGAAACAGAAGAAGAGTTTAGTGAACTTAAAGAATTTGTTTCAGATATAAAATTAGATAAACTAGGTGTATTTAAATATTCAAAGGAAGAAGGAACGTCAGCGGCTCTTATGGAGGATCAAATAGAGGAAGAAGTAAAAGAAAAAAGAGAAGAAGAAATAATGATACTTCAGCAAAAGATATCTAAAGACATAAATAAAGAAAAAATAGGTAAAATATATGAAGTTATAGTAGAAGGCACCAAAGAAAATATGTATAGTGGAAGAAACTATGAGATGTCACCAGAAATAGATGGAGAAATTTACTTTGAAAAGGATGAAAACGTAAAAATTGGTGATATAATAAAGGTGAAAGTAACTCATAGTTTAGAATATGATTTAATAGGAGTTGTTTATAATGAACTTAGCAAATAA
PROTEIN sequence
Length: 446
VEKIKVALVSLGCDKNRIDSELMLYKLNEEAELVKDPKEAQAIIVNTCGFIETAKEESINTILQMASYKKTHNCKVLVVTGCLTQRYKGELKDLIPEMDIMLGVNDYDKLLESIKIFLKSGEKSFYYKYSDIKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSRSKENILKEVENLAKQGVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRLLYCYPEEITKELIKEIKNNDKVCKYLDLPIQQISNSVLKRMGRKTTKETIINIIKELRKEIEGITLRTSLIVGFPGETEEEFSELKEFVSDIKLDKLGVFKYSKEEGTSAALMEDQIEEEVKEKREEEIMILQQKISKDINKEKIGKIYEVIVEGTKENMYSGRNYEMSPEIDGEIYFEKDENVKIGDIIKVKVTHSLEYDLIGVVYNELSK*