ggKbase home page

NECEvent2014_5_8_scaffold_302_19

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(20348..21625)

Top 3 Functional Annotations

Value Algorithm Source
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZV4_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 425.0
  • Bit_score: 853
  • Evalue 1.00e-244
  • rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:EDU36440.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 425.0
  • Bit_score: 853
  • Evalue 1.40e-244
gidA-1; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 425.0
  • Bit_score: 832
  • Evalue 5.20e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAAGGTTGTAGTTATCGGCGGAGGTTGGGCAGGATGTGCCGCAGCTATAAGCGCTAAAAAAGCTGGTGCTGATGTTAGTATATTTGAAAAGACGGATTTGCTTTTAGGATTAGGTAATGTTGGTGGGATAATGAGAAATAACGGAAGATTCACCGCAGCAGAGGAGCTTATATCTTTAGGTGCTGGTGATTTAATAAATATAACAGATGAAAACAGTAGACATAAAAACATAGATTTTCCGGGTCATAAACATGCCTGGCTTTACGATGTAAATAAAATAGAACCTGTTGTAAAAAATCATATGAAAAATATGGGCATAGATATTCATCTTATCTCTAGAATAGTAGATGTAAAAAAAGAAGGAGATAAAATAAAAGGCATATATATTTCAGACGGAACTTACGTAGATGGTGATGTATTTATAGAAACTACTGGTTCTACAGGACCTATGGGCAATTGTTTAAGATATGGTAATGGATGTTCTATGTGTGTTTTAAGATGTCCTGCCTTTGGCCCTAGAGTAAGCTTAACTTCAAGAGCCGGAGTAGATGATTTCCAAGGAGAAAGAGAAGATGATTTATTAGGAGCCTTTAGTGGTTCCTGTAAACTAGCTAAAGAAACTATGTCTGATGAATTGGTAAAAGAACTTGATGAAACTGGAGTATTGGTTTTAAAGGTTCCAAAAGAAGATATAAACCTAGATAAATTAAAAATGAAAGTTTGTCAACAATACGCTCTAAAAGAATTCGCAGAGAATATTGTCATTCTAGATACTGGACACGCAAAATTAATGACTTCCTACTATCCTCTAGAAAAACTAAGAAAAATAAAAGGACTAGAAAGTGTAAAATATATAGATCCTTATGCAGGTGGAAAAGGAAATTCTATAAGATATTTGTCTGTGGCTCCAAGAACAGATGATATGAAAGTGAAAGGACTAGATAACCTCTTTGTAGGAGGAGAAAAAAGCGGCTTATTTGTTGGGCACACTGAAGCCATAACCACAGGAAGTTTAGCTGGACACAATGCTGTAAGATATTGCTTAGGCATGCCAATGTTAATTCTTCCAAGAAATATAGCTTTAGGAGATTTAATAGCCTATGCAAATGATAAGCTTTATTCAAAGAAAGGTAGAAAAAATAGATATACCTTTGCCGGTGCAGAATACTTTAAGAGGATGGTTGAAGAAAACTTATATACTACAGATAGAGAAGAAATAAAAAAAAGAGTTTCAAAATTAAACCTAGAAGATGCTTTAGCTCAAAAATTAGTATAA
PROTEIN sequence
Length: 426
MKVVVIGGGWAGCAAAISAKKAGADVSIFEKTDLLLGLGNVGGIMRNNGRFTAAEELISLGAGDLINITDENSRHKNIDFPGHKHAWLYDVNKIEPVVKNHMKNMGIDIHLISRIVDVKKEGDKIKGIYISDGTYVDGDVFIETTGSTGPMGNCLRYGNGCSMCVLRCPAFGPRVSLTSRAGVDDFQGEREDDLLGAFSGSCKLAKETMSDELVKELDETGVLVLKVPKEDINLDKLKMKVCQQYALKEFAENIVILDTGHAKLMTSYYPLEKLRKIKGLESVKYIDPYAGGKGNSIRYLSVAPRTDDMKVKGLDNLFVGGEKSGLFVGHTEAITTGSLAGHNAVRYCLGMPMLILPRNIALGDLIAYANDKLYSKKGRKNRYTFAGAEYFKRMVEENLYTTDREEIKKRVSKLNLEDALAQKLV*