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NECEvent2014_5_8_scaffold_474_3

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(1407..2276)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 576
  • Evalue 3.00e-161
truB; tRNA pseudouridine synthase B (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 289.0
  • Bit_score: 555
  • Evalue 1.10e-155
tRNA pseudouridine synthase B n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUB7_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 576
  • Evalue 2.10e-161
  • rbh

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
ATGGATGGAGTAATAAATGTTTTAAAACCAAAGGGAATAACATCCTTTGATGTAGTTAGAGATATAAGAAAAATAGCAAAAATAAAAAAAGTTGGTCACACAGGTACATTAGATCCCTTAGCTTCTGGAGTTCTTCCAGTGTGTATAGGTAAAGCTACAAAAATAGTAGACTATATAATGGAGGGAACCAAAACCTATAGAGTAGAAATGAAACTTGGAACTACTACGGATACCTATGATAGAGAAGGTACTGTGTTAGAGGAAAAAGAAGTTAGTGTATCTCCTACAGAAGTAGAAAAGGCTATAGAAAAATATAAAGGTGATATAAAGCAAGTGCCACCTATGTATTCTGCCTTAAAAGTTAATGGACGAAAACTTTATGATTTAGCTAGAAAAGGTATAGAGGTAGAAAGAGAAGCGAGAAAAATACAAATACATGATATATGTATTTTAAGTATAGATATGCCCTATATTATATTTGATGTTAAGTGTTCAAAGGGAACTTATATAAGGAGTTTATGTTTTGATATAGGAAATGATTTAGGCTCAGGAGCGGTAATGTGGAATCTAGAAAGATTGGAAGCAAGCCCCTTTAATATAAAAGAAGCAATAAAATTAGAAGATTTAAATGAGGAAAATATAAAGCAATTTATAACACCTATAGATGAAGCTTTAAAGGATTATGAAAAATTATATTTAGATAAAAAATTTGAAAAGCTTGTACTAAATGGTGTAATATTAAAAGATAGAAGAGTTTTAGATAATATAGAAGAAAATAAACTATATAGAACTTATATAGAAGATGATAACTTTATAGGATTAGGAATGAAAAACGCATATGGATTTAAAATTCATAAATTATTAACTTAG
PROTEIN sequence
Length: 290
MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIMEGTKTYRVEMKLGTTTDTYDREGTVLEEKEVSVSPTEVEKAIEKYKGDIKQVPPMYSALKVNGRKLYDLARKGIEVEREARKIQIHDICILSIDMPYIIFDVKCSKGTYIRSLCFDIGNDLGSGAVMWNLERLEASPFNIKEAIKLEDLNEENIKQFITPIDEALKDYEKLYLDKKFEKLVLNGVILKDRRVLDNIEENKLYRTYIEDDNFIGLGMKNAYGFKIHKLLT*