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NECEvent2014_5_8_scaffold_1144_5

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(3653..4363)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 471
  • Evalue 6.50e-130
rluB; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 236.0
  • Bit_score: 451
  • Evalue 1.40e-124
  • rbh
Pseudouridine synthase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T0J3_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 471
  • Evalue 4.60e-130
  • rbh

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
ATGGAAGAAAGATTACAAAAGTATATGGCCTCTTGTGGCGTTGCGTCTAGAAGAAAATGTGAAGATATTATTTTAGAAGGGCGAGTAGAAGTAAATGGCATTAAAATAAAAGAAGTAGGCACAAAAATTATATCTGGAAAAGACATTATAAAAGTAGATGGGAATATTATAAAACCAGAAGAAAATAAAATTTACATTTTACTTAATAAACCAAAAGGGTATCTATGTACTGCTAAAGATGAAAAGGGCAGAAAAACTATTTTAGATTTAGTAAAAGTTAAAGAAAGAATATACCCTATAGGCAGGTTAGATATGGACACATCAGGTATAATAATACTTACCAATGATGGAGAAATATACAATAAGATTATTCATCCTAAATTTGAAAAAATAAAGACTTATAAGGCTAAAGTAAAAGGAACTATGAAAAAAGACCATATAGAGTTATTTAAAAAAGGCATAGATATAGGGGATTACATAACAGCTCCAGCGGCATTAGAAATTTTTAAAACAAATAAGGATACTTCTGAAATAATAATAAAAATTCACGAAGGTAAAAATAGACAAGTAAGAAGAATGTGTAAATCTATAGGTCATCCTGTTATAGATTTAGATAGAATTTCTATAGGTAATATATCAAAAGGTGATTTGAAATTAGGTGAGTGGAGATACTTAACTAAGAAGGAAATAGATTATATAATTAAAATATAA
PROTEIN sequence
Length: 237
MEERLQKYMASCGVASRRKCEDIILEGRVEVNGIKIKEVGTKIISGKDIIKVDGNIIKPEENKIYILLNKPKGYLCTAKDEKGRKTILDLVKVKERIYPIGRLDMDTSGIIILTNDGEIYNKIIHPKFEKIKTYKAKVKGTMKKDHIELFKKGIDIGDYITAPAALEIFKTNKDTSEIIIKIHEGKNRQVRRMCKSIGHPVIDLDRISIGNISKGDLKLGEWRYLTKKEIDYIIKI*