ggKbase home page

NECEvent2014_5_8_scaffold_1197_2

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 350..1219

Top 3 Functional Annotations

Value Algorithm Source
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SWC3_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 289.0
  • Bit_score: 562
  • Evalue 2.40e-157
  • rbh
Clostridium botulinum B2 450 B2_450_contig009, whole genome shotgun sequence {ECO:0000313|EMBL:KIS21915.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 564
  • Evalue 6.90e-158
mechanosensitive ion channel family protein similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 289.0
  • Bit_score: 535
  • Evalue 9.00e-150
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAATCATCATTTAACTTTGATTTTGATTTATCAAAAGGCGGAATAAAAATAGGAAACTTACCTATAGAGGCAGATTCTATATATTATTTTATATCAGTAGTTATTAAAATAGCAATTATATGTGTAACAATGTACTTATCTATAAAGATAGGTAATAAAATAATAAATAGATTTGTAAAAAAACAAAGCAATTTGAAATTTTCATTAGATGATAAAAAAGCTACAACTGTAGGAACTATATTAAATAGTATATTAAGATATACAGTTTATTTTGTAGGTATCTTCGCTATAATAGAAATTTTATTTGGAAGAATAGGTTCTATATTTGCAGGACTTGGTGGTGCAGCTATAGGTTTAGGAGCTAAAGATCTTATAAAGGATGTAATAAGTGGATTTTTTATATTATTTGAAGATCAATTTTCAGTAGGCGATTATATAACTGTAGAAGATAAATCTGGGATAGTTGATACCATAGAACTTAGAGTAACTAAATTAAAAGATTTTAATGGAGATCTTCATATAATACCTAATGGTTTAATAAATAAAGTAACTAATCATGCTAAAAATAATATAAGATTTAAGATAGAAATTAATGTAGCTTATGAAGTAGATATAGAGGAAGCAATAAATACAATTAATAAGGTATGTTTAGAGTATGCAAAAGAAAGAAAAGACATAGTAGTAGAACAACCAGCAGTATATGGAATAACTTCATTGGACAACAATGGAATAAGTATAGTTGTATATGGAAGAACAACTCCAATGAATCAATGGACTGCAGAAATTGAATTGAGAAAAAGAATATTAATAGAATTAAAAAACGAAAATATAGAAATACCTTATAATAAATTTCAAATTATAAAATAG
PROTEIN sequence
Length: 290
MKSSFNFDFDLSKGGIKIGNLPIEADSIYYFISVVIKIAIICVTMYLSIKIGNKIINRFVKKQSNLKFSLDDKKATTVGTILNSILRYTVYFVGIFAIIEILFGRIGSIFAGLGGAAIGLGAKDLIKDVISGFFILFEDQFSVGDYITVEDKSGIVDTIELRVTKLKDFNGDLHIIPNGLINKVTNHAKNNIRFKIEINVAYEVDIEEAINTINKVCLEYAKERKDIVVEQPAVYGITSLDNNGISIVVYGRTTPMNQWTAEIELRKRILIELKNENIEIPYNKFQIIK*