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NECEvent2014_5_8_scaffold_1197_7

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 4493..4939

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=13 Tax=Clostridium RepID=A5I800_CLOBH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 304
  • Evalue 6.10e-80
  • rbh
ssb; single-strand binding protein similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 148.0
  • Bit_score: 303
  • Evalue 3.80e-80
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1379739 species="Bacteria; Firmicutes; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 148.0
  • Bit_score: 303
  • Evalue 1.90e-79

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 447
TTGAATAAAGTTGTTTTAATAGGTAGATTAACCAAAGATCCTGAGTTAAAATTTACTCCAGGAAATGGGACAGCAGTTGCCACCTTTACTTTGGCTGTAGATAGAAGATTTTCAAAAGATGGCCAGAGAGAAGCAGATTTCATCCCTATAGTAGTATGGGGAAAACAAGCAGAATCTACAGCTAATTATATGAGTAAAGGAAAACTTATGGGTGTTAGTGGTAGAATTCAAACAAGAAGCTATGAAGCTAAAGATGGTACAAGAAGATATGTAACAGAAGTCATAGCTGAAGAAGTTAAATTTCTTGAGTGGGGCAATAAGCCTACAACGGATTCAACATATAATAATGGGTCAGAACCAAGTTACCAATCAGGCCAAGGCTTTGGAAATGGAAACAGTTTTGACGACGATATAATTCCAGTGGATGATGGAGACATCCCATTTTAA
PROTEIN sequence
Length: 149
LNKVVLIGRLTKDPELKFTPGNGTAVATFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYEAKDGTRRYVTEVIAEEVKFLEWGNKPTTDSTYNNGSEPSYQSGQGFGNGNSFDDDIIPVDDGDIPF*