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NECEvent2014_5_8_scaffold_1241_2

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 2311..3087

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 524
  • Evalue 1.20e-145
ytzG2; RNA pseudouridine synthase YtzG (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 257.0
  • Bit_score: 326
  • Evalue 5.60e-87
Pseudouridine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z360_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 524
  • Evalue 8.50e-146
  • rbh

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 777
ATGAGATTAGATAAATTTTTGGCACAATCACAAATAGGTACACGAAAAATTGTAAGAGAATATGTTAAAGATGGTTTAGTAAAAATTAATGGAATAACTATTTTTGAGCCTGCAGTTGAAATTAATGAAATAGAAGATATTATTGAGTATAATGGACAAATTACTGAATATAAAGAAAAGGTATATTACATGTTTAATAAACCAAGTGGATGTATTACTGCTAGAAAAGATGCTGATGACAAGACTGTATTTGATTATTTTAAAGAGATTAATATGGATGGAGTATTTCATGTTGGAAGATTAGATAAAGATACAGAAGGATTATTACTTTTTACAAATGATGGTGATTTTAATAATAAACTTATGTCTCCTAAATTTCATGTAGATAAGAAATATTTCTTTATAGCATTAGGCAGTATAGATGAAAAAAACAAAAAAAATCTAGAAAGTGGAGTAAGCATAGGTGAAAATGAACCTATAACAAAGCCCGCTAAAATAGAAAATTTAAAAAATGGAACTTATGAAGAATTAAAAGATAAATTGAATTTAAAAAAATATTATCATGTTAATTCTGAATATTATATACAGCCAGTTGTTTGTGGACACATTACAATTTCAGAAGGACGCAGGCATCAGGTAAAGAGAATGCTTAAAAGTATTGGCTGCCATGTTATTTATCTTAAAAGAATGTCAATTGGAAATTTGGCTCTTGATGAGTTTTTAAAAAAGGGAGACTACAGAAGTCTTACGAAGGATGAAATAAAGATTTTATATTGA
PROTEIN sequence
Length: 259
MRLDKFLAQSQIGTRKIVREYVKDGLVKINGITIFEPAVEINEIEDIIEYNGQITEYKEKVYYMFNKPSGCITARKDADDKTVFDYFKEINMDGVFHVGRLDKDTEGLLLFTNDGDFNNKLMSPKFHVDKKYFFIALGSIDEKNKKNLESGVSIGENEPITKPAKIENLKNGTYEELKDKLNLKKYYHVNSEYYIQPVVCGHITISEGRRHQVKRMLKSIGCHVIYLKRMSIGNLALDEFLKKGDYRSLTKDEIKILY*