ggKbase home page

NECEvent2014_5_8_scaffold_674_7

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(5238..5591)

Top 3 Functional Annotations

Value Algorithm Source
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 228
  • Evalue 6.20e-57
mRNA interferase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TEX0_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 228
  • Evalue 4.40e-57
PemK family protein similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 117.0
  • Bit_score: 225
  • Evalue 8.00e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
ATGACACAACAGATAGTAAAAAGAGGAGATATATTTTATGCTGATCTAAGTCCTGTAGTAGGTTCAGAGCAAGGCGGAATAAGGCCGGTTATAGTTATACAAAATAATGTAGGAAATAAATATAGTCCCACAGTAATAATTGCAGCAATAACTTCACAAATAAATAAGGCTAAACTACCAACCCATGTAGAAATATCCTCAGAGGATTATGGATTAAATAAAGATTCAGTAGTATTGCTAGAACAAATAAGGACTTTAGATAAGAGAAGATTAAAAGAAAAAATAGGTCATATGACAGATGAAGATATGAAAAAAGTTGATACTGCTATTTTAGTTAGTATGGCTTTGAATTAA
PROTEIN sequence
Length: 118
MTQQIVKRGDIFYADLSPVVGSEQGGIRPVIVIQNNVGNKYSPTVIIAAITSQINKAKLPTHVEISSEDYGLNKDSVVLLEQIRTLDKRRLKEKIGHMTDEDMKKVDTAILVSMALN*