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NECEvent2014_5_8_scaffold_1616_3

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(1784..2284)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 346
  • Evalue 1.70e-92
Peptide deformylase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T9E4_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 166.0
  • Bit_score: 344
  • Evalue 6.00e-92
  • rbh
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 165.0
  • Bit_score: 327
  • Evalue 2.80e-87
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 501
ATGCCAACAAAATCAATCCTATTATTAGGTGATGAAATACTTTACAGAATTTCTGAGGAAATACAGAAATCAAATTTAGATAAAGCTAAGCAAGTAATCAATGACTTACATGACACGATTGTTTCTTTTAAAAATCAATATGGATTTGGTAGAGCCATTGCGGCACCACAGATTGGTGAATCTGTAAGAATAATCTACATGCATTTAGGCTATAAAACTCATTATTTCATTAATCCAGTTCTTGAATTTATTGGAGACGATACCTTTCAACTATGGGATGATTGCATGAGTTTTCCAGGTCTTGAAGTATATGTAGAAAGACATAAGAAGTGCAAAGTAACTTATAAAAATTTAAACTGGGAAGATTGTGAAATGTATCTTGAAGGTGATCTATCAGAACTATTTCAACACGAGTATGATCATTTAGACGGAATTTTGGCTGTACAACGTGCAAAGGATTTAAAATCATTTCGAATAAACAAGAATAAGAGTGGCTGTTAA
PROTEIN sequence
Length: 167
MPTKSILLLGDEILYRISEEIQKSNLDKAKQVINDLHDTIVSFKNQYGFGRAIAAPQIGESVRIIYMHLGYKTHYFINPVLEFIGDDTFQLWDDCMSFPGLEVYVERHKKCKVTYKNLNWEDCEMYLEGDLSELFQHEYDHLDGILAVQRAKDLKSFRINKNKSGC*