ggKbase home page

NECEvent2014_5_8_scaffold_968_2

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 2003..2743

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 501
  • Evalue 7.90e-139
truA_1; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 246.0
  • Bit_score: 472
  • Evalue 6.10e-131
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SUX6_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 501
  • Evalue 5.70e-139
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGACTAATATAAAATTATACATACAATACGATGGTTCTAAATATAACGGTTGGCAAAAACAAAAAGAAAATGACAATACTATTCAAGGGAAAATTGAAAATGTACTTTCTCTTATGACAGGAGAAGATATAAACCTAATAGGTTCTGGTAGAACAGATGCAGGCGTACATGCAAATATGCAGGTAGCTAATTTTCATACAAATTTTCAAGGTTCTACAAATGAAATATTAAACTATTGCTATGAATACTTACCTAAAGATATCGTAGTTTATGATGCCTTTCATGTAGATGAGAGATTTCACTCTAGATTAAATGTTAAAAAGAAAAAATACACCTATAAGATTTGTAATAAAAAATTTCATGATGTATTCTCTAGAAAATACTCTTATCATGTACCACAAACTCTAGATATAGAGGCTATGAAAGAAGCTTGTACTTATTTAGTAGGAAGACATGATTTTGCATCTTTTACTGCAGCAAGATCAAAAAAGAAATCCACTGTAAGAACTCTTTATAGCATAGATATTATAAAAAAGGATGGCTATGTAGATATAGTATATTTAGGTAGTGGATTCCTACATAAAATGATAAGAATATTAACAGGTACTCTTATAGAAATAGGATTACACAATCTAAGCCCTATGAACGTAAAAACCATACTAGAGGCAGAAGATAGAAGAAAAGCAAGCTCTACTGCCCCAAGTCAAGGATTATTTATGACCAGTGTAACCTATGAATAA
PROTEIN sequence
Length: 247
MTNIKLYIQYDGSKYNGWQKQKENDNTIQGKIENVLSLMTGEDINLIGSGRTDAGVHANMQVANFHTNFQGSTNEILNYCYEYLPKDIVVYDAFHVDERFHSRLNVKKKKYTYKICNKKFHDVFSRKYSYHVPQTLDIEAMKEACTYLVGRHDFASFTAARSKKKSTVRTLYSIDIIKKDGYVDIVYLGSGFLHKMIRILTGTLIEIGLHNLSPMNVKTILEAEDRRKASSTAPSQGLFMTSVTYE*