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NECEvent2014_5_8_scaffold_853_3

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 2602..3306

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium sporogenes RepID=G9F2M2_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 460
  • Evalue 1.10e-126
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 234.0
  • Bit_score: 458
  • Evalue 4.30e-126
sigK; sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 234.0
  • Bit_score: 457
  • Evalue 1.90e-126
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 705
GTGTTCTTTTTAAGTTACTTATGGGATGTATTAGGAAGTGCATTATTTTTAACAGGCTATGTCACAGGAAATACTTCTTTTCCCAAGCCTTTAAGTGATGAGGAAGAAAAATATTATTTGGATAGGCTAAAAAAAGGCGATGCTCTAGCAAAAGATATTTTGGTAGAAAGAAATTTAAGGTTAGTGGCTCACATAGTAAAAAAATATTCTTATCCTGGAAAAGATATTGATGATTTAATATCTATAGGAACTGTAGGTCTTATAAAGGCTATAGACTCTTTTGATAATTCAAAGGGTACTAGACTTGCCACTTACGCAGCAAGATGTATAGAAAATGAAATATTGATGCTCATAAGAAATAATAAAAAAACTAAAGGTGAAGTATATCTTCAAGATCCTATAGGAGTAGACAAAGAAGGAAATGAAATTTCTCTTATGGATATATTAAGTAGCGATGAGGATTCTATAATAGAAATAGTTTCAACAAAAATAGAAGTAAAAAAGCTATATGGAAAAATAGAAACTTGCCTTAGAGGAAGGGAAAAAAAGGTGATCCAAATGAGGTATGGTTTAAAGGATGGGAGACCTAGAACTCAAAGAGAAATAGCAGGTATACTAAACATATCTAGATCCTATGTTTCACGTATAGAAAAAAAGGCCCTTAAAAAGCTTTATAAAGAATTAAATTATAATAAAAATATTTAA
PROTEIN sequence
Length: 235
VFFLSYLWDVLGSALFLTGYVTGNTSFPKPLSDEEEKYYLDRLKKGDALAKDILVERNLRLVAHIVKKYSYPGKDIDDLISIGTVGLIKAIDSFDNSKGTRLATYAARCIENEILMLIRNNKKTKGEVYLQDPIGVDKEGNEISLMDILSSDEDSIIEIVSTKIEVKKLYGKIETCLRGREKKVIQMRYGLKDGRPRTQREIAGILNISRSYVSRIEKKALKKLYKELNYNKNI*