ggKbase home page

NECEvent2014_5_8_scaffold_1400_6

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 4363..4998

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFQ6_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 192.0
  • Bit_score: 381
  • Evalue 5.60e-103
  • rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25008.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 192.0
  • Bit_score: 381
  • Evalue 7.90e-103
collagen triple helix repeat family protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 200.0
  • Bit_score: 249
  • Evalue 7.20e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 636
GTGATTTTATTGAATAATAAATGTAAGATGATATGTATTCCCACATGTGGTAGATGCACTTGCCCTCGTGGTGTAACTGGTCCTACTGGGCCACAAGGCATTACTGGTCCTACTGGGCCACAAGGCGTTACTGGTCCTACTGGGCCACAAGGCATTACTGGTCCTACTGGGCCACAAGGTATTACTGGTCCTACTGGACCTCTTGTTACAGCCAATAATGCTCGTATAACAAATGCTGCCATTCAGACTGTAGATACAGGTGATCCAGTTTCTCTTTCAACAAATAATGTTATTAATGGAACAGCAATTTCTCATACACCAGGAACACCTTTTATTATTTTAGAACCTGATCAGACTTATTATGCTTCTTATGAAGCCGCATCAAATTTAGGTAATGCTGGTGAAGGAAGTGCAATTCTACAATTTAATTTAAATGGCTCTTTAGTAGGAGGAACACAAAGTGAATTTAGTAATTTACAAAGCTTAAATTTACCTGCATCCTCTAGGTTTTCATTAAGTTCAGCAGCTGTTTTTAATACACCTGGAGGAGCTCCTAGTGTTTTAACATTATCAAATGCTTCAGGGCATCCAATAACTGTTGAAGGAGCTAATGTTAATATAATAAAACTTGAATAA
PROTEIN sequence
Length: 212
VILLNNKCKMICIPTCGRCTCPRGVTGPTGPQGITGPTGPQGVTGPTGPQGITGPTGPQGITGPTGPLVTANNARITNAAIQTVDTGDPVSLSTNNVINGTAISHTPGTPFIILEPDQTYYASYEAASNLGNAGEGSAILQFNLNGSLVGGTQSEFSNLQSLNLPASSRFSLSSAAVFNTPGGAPSVLTLSNASGHPITVEGANVNIIKLE*