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NECEvent2014_5_8_scaffold_2184_3

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 2480..3049

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KUU6_CLOBM similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 189.0
  • Bit_score: 365
  • Evalue 3.70e-98
  • rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24649.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 374
  • Evalue 6.60e-101
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 189.0
  • Bit_score: 364
  • Evalue 2.30e-98
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
TTGGCACAGCAATATACCAAAAAAATGATTCGTGAGGTATTCATAAAGATGCTGAATGAACGTCCAATTAACAAAATCACAGTTAAGGAAATTGCTACAGTATGTGAGATAAATAGAAATACTTTTTATTATTACTACACAGACATATATGCACTTTTGTCAGAGATATTCCAAACAGAACTTCAGACAGTAATTGATGAATATAATGATACACTTTCCTGGGAGGAGAGTTTTATTGTAGCTGCTAGATTTGCTTTAGAAAACAAAACAGCCGTTTATCATGTATATAATTCCATGCAGAGAGAAGAACTAGTGAACTATATATACAATGTATCAGGGAATGTGATGATTCGGTATGTTGAAAAAGTAAGCGAGGGTATCTCAGCTTCTTCGGGAGATAGAAAACTTATTGCTTCCTTTTATCAGTGTGCCCTTACTGAAATGGTGCTACAGTGGATTGCTGCCGGAATGAAGGAGGACCCTGATACTATTATTAGACGAATCGGGTATCTTTTCGATGGAAACATCGAATTGTCCCTTAAGCGAAGTGCTGGTTTAAATGATACCTAG
PROTEIN sequence
Length: 190
LAQQYTKKMIREVFIKMLNERPINKITVKEIATVCEINRNTFYYYYTDIYALLSEIFQTELQTVIDEYNDTLSWEESFIVAARFALENKTAVYHVYNSMQREELVNYIYNVSGNVMIRYVEKVSEGISASSGDRKLIASFYQCALTEMVLQWIAAGMKEDPDTIIRRIGYLFDGNIELSLKRSAGLNDT*