ggKbase home page

NECEvent2014_5_8_scaffold_2217_1

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(18..2120)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=471871 species="Bacteria; Firmicutes similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 700.0
  • Bit_score: 1409
  • Evalue 0.0
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 700.0
  • Bit_score: 1381
  • Evalue 0.0
  • rbh
DNA topoisomerase 1 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T930_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 700.0
  • Bit_score: 1409
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2103
ATGGGACAAAAAATGGGACAAAATTTAGTAATAGTAGAATCACCAGCAAAAGCTAAAACCATAAAGAAATATTTAGGAAAGAACTATGTAGTTGAGGCATCAATGGGACATGTAAGAGATTTACCTAAAAGTCAGTTAGGTGTTGATATAGAAAACAATTATGATCCTAAGTATATAACAATAAGAGGAAAAGGTGAACTTTTAGATAAGCTTAGAAAAGAAGCTAAAAAAAGCTCTAAAGTATATTTAGCAACGGACCCGGATAGAGAGGGAGAAGCTATTTCTTGGCATTTAGCTCATGTTTTAAAAATAGATGAGAACGAGGAATGCAGAATAGAATTTAATGAGATAACTAAAACTTCTATAAAGAAAGCAATAAAATCTCCGAGAAAAATAAATGAAAATGTAGTAGACGCTCAGCAAGCAAGAAGAGTTTTGGATAGATTAGTAGGATATAAAATAAGCCCTATACTATGGAGCAAGATTAAATGGGGATTAAGTGCAGGTAGAGTTCAATCTGTGGCTTTAAGAATGATATGCGATAGAGAAAGAGAAATTGAAGAATTTATACCAAAAGAGTATTGGACTATAGAATGTGAGGTACATAAGGAAAAAAATAAAAAGCCTTTCATAATAAAGTTAACTACTAAATCAGGAAAAAAAATAGAGATAACTAATGAAGAGGAAGCTATTGAAGTAATACAAGACTTAAAAAAAGGTGAATTTATTGTAAAAAAAATAAAGAAGACAAAGAAAAATAAAAATCCTTTACCACCTTTTACTACAAGTACTCTTCAACAGGATTCTTATAAGAAATTAAATTTTCCTACTAAAAAGACTATGTCTATAGCTCAACAACTATATGAAGGTATAGATATTAAGGGCTTCGGTGCAGTAGGTCTTATAACTTACATGAGAACGGATTCTATAAGAATATCAGAAGAAGCTCAAAAATCAACTTTAGAGCATATCAAAAGTAATTTTGGAGAGGAATATATACCAAAAACTCCAAGAGTTTTTAAAGGAAAGAAAAATATACAGGATGCCCATGAAGCTATAAGACCAACTAATATTGGAATAACTCCTACACTGGCTAAGGAAAGCTTAACACCTCAACAATATAAACTATACGAATTAATATGGAAAAGGTTTGTAGCAAGCCAAATGGCTTCTTGTATTCTAGATTCAACATCTATAAGTATAGAAAATGGCAAATATGGATTAAGAGCTAGTGGATCCTTAATAGCTTTTGATGGTTTCATGAAGGTATATGAATATTCTACAGAAGAAGAAAAGGATAGTATAAAGATACCTCAATTAGAAGAAAATGAAATACTAAAAGAAAAATCTATAAATAAAAGTCAGCATTTTACCCAACCACCAGCTAGGTATTCAGAAGCTTCTTTAGTAAAAACTTTAGAAGAAAATGGTATAGGAAGGCCAAGTACTTATGCTCCTATTATATCTACTATATTAGATAGAAAATATGTAGAAAGAGAGAAAAAAACATTAAAACCTACAGAACTAGGAGACATAGTAAATAACATAGTAAGTGAATATTTTAAACAAATAGTGGATCTAGAATTTACAGCGGATATGGAAAATAAGCTAGATTATATAGAGGAAGGAAAAAAATCATGGAGAGAGGTAGTAGATGATTTCTTTCAGCCATTAAAAAAATCCATAGAAATAGCAGAAAAAGAAATAGCAAAAGTAACCATTGAAGATAAAGTAACAGATGTAATATGTGAAAAATGTGGAAGAAATATGGTTATAAAACATGGAAGATATGGAGATTTCTTAGCATGTCCAGGATATCCGGATTGTAAAAATACTAAACCTATAGTAGAGGAAATAGATGTTAAGTGTCCTAAATGTGGAGATGGAAAAGTTTTAATAAAGAAAAGTAGAAAAGGTAGAAAGTTTTATGGATGCAGTAATTATCCAGACTGTGATTTTGTAAGTTGGTCAGAACCTGTAAAAGAAAAGTGTGAAGAATGTGGAAGCTACATGGTAAAAAAACAAAGTAAAGCTAAAGGTGAATACTATGAATGTGCTAATTCAGAATGTAAGCATAGAAAATATTTAAATAATAAAGAGTAA
PROTEIN sequence
Length: 701
MGQKMGQNLVIVESPAKAKTIKKYLGKNYVVEASMGHVRDLPKSQLGVDIENNYDPKYITIRGKGELLDKLRKEAKKSSKVYLATDPDREGEAISWHLAHVLKIDENEECRIEFNEITKTSIKKAIKSPRKINENVVDAQQARRVLDRLVGYKISPILWSKIKWGLSAGRVQSVALRMICDREREIEEFIPKEYWTIECEVHKEKNKKPFIIKLTTKSGKKIEITNEEEAIEVIQDLKKGEFIVKKIKKTKKNKNPLPPFTTSTLQQDSYKKLNFPTKKTMSIAQQLYEGIDIKGFGAVGLITYMRTDSIRISEEAQKSTLEHIKSNFGEEYIPKTPRVFKGKKNIQDAHEAIRPTNIGITPTLAKESLTPQQYKLYELIWKRFVASQMASCILDSTSISIENGKYGLRASGSLIAFDGFMKVYEYSTEEEKDSIKIPQLEENEILKEKSINKSQHFTQPPARYSEASLVKTLEENGIGRPSTYAPIISTILDRKYVEREKKTLKPTELGDIVNNIVSEYFKQIVDLEFTADMENKLDYIEEGKKSWREVVDDFFQPLKKSIEIAEKEIAKVTIEDKVTDVICEKCGRNMVIKHGRYGDFLACPGYPDCKNTKPIVEEIDVKCPKCGDGKVLIKKSRKGRKFYGCSNYPDCDFVSWSEPVKEKCEECGSYMVKKQSKAKGEYYECANSECKHRKYLNNKE*