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NECEvent2014_5_8_scaffold_2928_2

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(2051..2614)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T234_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 187.0
  • Bit_score: 376
  • Evalue 1.60e-101
  • rbh
Clostridium botulinum B2 450 B2_450_contig004, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25414.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 377
  • Evalue 1.00e-101
RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 187.0
  • Bit_score: 347
  • Evalue 1.70e-93
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
GTGAAAATAGATGAAGATAATTTTATAAGGCAGCTAAAATATAGGAATTCCAAAGCATTAGATTTTATTGTAGACGAATATAGTAATTTGATTTTTAGAATTATACGTACCGTATTAAATTCAAATTTTCATTCTCAGTATGTAGAAGAATGTGCAAATGATGTATTTTGGTCTGCGTGGAGTAATATTGATAGTTTTGATGAGCAAAAAGGGAACTTTAAATATTGGATTGCTGCTATATCTAAATATAAAGCTATAGATTACAAAAGAAAACTTTTCAAACAAAATAATATTGAATCTATAGATGATCATATATTATGTGATGATACTAGCATAGAAAACGATTTTATACTAAATGAAAATAAAGAAGAAATTTTTGAAGCAATAAATTATATGAAAAAAAAAGATAGGGAAATATTTATAAGAAGGTACTTTCTAGATGAGAAAGTAGAAAATATAGCTAACGCTTTTGGAGTAAATAGAAATTTAATAGATAAAAGACTTTCAAGGGGACGTAAATTTTTAAAGGAAAAACTTATACTTTTGAAAGGAGAAATATTATGA
PROTEIN sequence
Length: 188
VKIDEDNFIRQLKYRNSKALDFIVDEYSNLIFRIIRTVLNSNFHSQYVEECANDVFWSAWSNIDSFDEQKGNFKYWIAAISKYKAIDYKRKLFKQNNIESIDDHILCDDTSIENDFILNENKEEIFEAINYMKKKDREIFIRRYFLDEKVENIANAFGVNRNLIDKRLSRGRKFLKEKLILLKGEIL*