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NECEvent2014_5_8_scaffold_4191_3

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 1185..1850

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 448
  • Evalue 5.50e-123
ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 222.0
  • Bit_score: 446
  • Evalue 5.50e-123
  • rbh
Pseudouridine synthase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SHC0_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 448
  • Evalue 3.90e-123
  • rbh

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
ATGGAACGTTTAGATAAAATATTAGCTAATTTAGGATATGGTACAAGAAAAGAAGTTAAGGCCTTGATTAAAAAGGGTCAAGTTGATGTTGATGGTGAAGTTGTTAAGGATAATGGTATGCAAATAGATCCAGAAAAAAATAAAATATTTGTATTTGGAAAAGAATTGGTTTATAAAAAATATATTTATTTAATGATGAATAAACCCCAAGGGGTAGTTTCTGCAACTTTTGACAACTATGATGAAACTATTGTAGATTTGTTAGAAGATGAAGATAGAATTTTTGAACCTTTTCCTGTAGGAAGGTTAGATAAAAATACAGTAGGATTACTTTTACTTACTAATGATGGTGAATTAAATCACAGACTTATATCTCCTAAATGGCATGTGGATAAAATATATTATGCTAAAATTAATAAAAAGGTTACTGATGAAGATATAGAGAAATTTAAAAAAGGCATAGTATTAGATGATGGATATGAATGTTTTCCTGCAAAGCTTGAAATAATAAAATCATTTAATGAAGAATCAGAAGTAAGAGTTACTATACATGAAGGTAAATTTCATCAAGTTAAAAGAATGTTTGAAAGTGTTGATAAAAAGGTTATTTACTTAAAAAGAGAAGAATTTGGACCACTAAAATTGGATGAAAGCTTAGAAGAAGGT
PROTEIN sequence
Length: 222
MERLDKILANLGYGTRKEVKALIKKGQVDVDGEVVKDNGMQIDPEKNKIFVFGKELVYKKYIYLMMNKPQGVVSATFDNYDETIVDLLEDEDRIFEPFPVGRLDKNTVGLLLLTNDGELNHRLISPKWHVDKIYYAKINKKVTDEDIEKFKKGIVLDDGYECFPAKLEIIKSFNEESEVRVTIHEGKFHQVKRMFESVDKKVIYLKREEFGPLKLDESLEEG