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NECEvent2014_5_8_scaffold_1315

Alias: 175_008_scaffold_1315

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_1315_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..691
DNA (690bp) protein (230aa)
GGDEF domain protein n=3 Tax=Clostridium perfringens RepID=Q0TPG8_CLOP1 rbh
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:EDT23329.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 36
NECEvent2014_5_8_scaffold_1315_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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914..2140
DNA (1227bp) protein (409aa)
ATPase, AAA family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R922_CLOPF rbh
ATPase, AAA family {ECO:0000313|EMBL:EDT23284.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626
recombination factor protein RarA
NECEvent2014_5_8_scaffold_1315_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2270..2731
DNA (462bp) protein (154aa)
Rrf2 family protein n=4 Tax=Clostridium perfringens RepID=Q0TPG9_CLOP1 rbh
rrf2 family protein
Rrf2 family protein {ECO:0000313|EMBL:EDT71524.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.
NECEvent2014_5_8_scaffold_1315_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2724..3920
DNA (1197bp) protein (399aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=883064 species="Bacteria
Cysteine desulfurase n=6 Tax=Clostridium perfringens RepID=H7CXI0_CLOPF rbh
NECEvent2014_5_8_scaffold_1315_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3923..4351
DNA (429bp) protein (143aa)
FeS cluster assembly scaffold protein NifU n=11 Tax=Clostridium perfringens RepID=Q0SS38_CLOPS
nifU; nifU protein
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EDT26482.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_5_8_scaffold_1315_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4403..5455
DNA (1053bp) protein (351aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
tRNA-specific 2-thiouridylase MnmA n=6 Tax=Clostridium perfringens RepID=MNMA_CLOP1 rbh
NECEvent2014_5_8_scaffold_1315_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5723..6217
DNA (495bp) protein (165aa)
PRC-barrel domain protein n=9 Tax=Clostridium perfringens RepID=Q0TPH3_CLOP1 rbh
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:EDT22847.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_5_8_scaffold_1315_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6234..6455
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3M9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22843.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
Displaying 8 items

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