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NECEvent2014_5_8_scaffold_718_9

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(10072..10641)

Top 3 Functional Annotations

Value Algorithm Source
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 393
  • Evalue 4.70e-107
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDT22323.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDT22323.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 393
  • Evalue 2.30e-106
dTDP-4-dehydrorhamnose 3,5-epimerase n=3 Tax=Clostridium perfringens RepID=Q0TTI9_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 393
  • Evalue 1.70e-106
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
ATGAGTAACTTTAAATTTATAGAAACAAAAATAAAAGATTTATATATTATAGAACCAAAAGTTTTTGGAGATGAAAGAGGATATTTCATGGAAACATATAGTCAAAAAGCTTTTGAAGAAGCTGGACTTACTATGAAATTTGTTCAAGATAATGAATCAAAATCTAAAAAAGGTGTTTTAAGAGGATTACATTTCCAAACTAAACATACTCAAGGAAAGCTTGTTAGAGTAACTCAAGGAGAGGTTTGGGATGTAGCTGTAGATTTAAGAAAAGGATCACCTACATTTGGACAATGGGAAGGTGTTCATTTAAGTGCAGAAAATAAAAGACAATTCTACGTTCCAGAAGGATTTGCTCATGGATTTGTAGTTTTATCTGATGAAGCTGTATTTAACTATAAATGTACAGATTTTTATGCTCCAGAATATGACAGTGGACTTCTTTGGAATGATAAATATGTTAATGTAGAATGGCCTTTAGAAGGAATAGAAGAAATAATCTTATCAGAAAAAGATAAGAAACAAAAAACTTTAAAAGAATTAGATATTCCTTTTATATATGAAGGTTAA
PROTEIN sequence
Length: 190
MSNFKFIETKIKDLYIIEPKVFGDERGYFMETYSQKAFEEAGLTMKFVQDNESKSKKGVLRGLHFQTKHTQGKLVRVTQGEVWDVAVDLRKGSPTFGQWEGVHLSAENKRQFYVPEGFAHGFVVLSDEAVFNYKCTDFYAPEYDSGLLWNDKYVNVEWPLEGIEEIILSEKDKKQKTLKELDIPFIYEG*