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NECEvent2014_5_8_scaffold_1659_3

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(1217..3223)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator/sensory box protein n=4 Tax=Clostridium perfringens RepID=H7CZ64_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 668.0
  • Bit_score: 1301
  • Evalue 0.0
  • rbh
sigma-54 dependent transcriptional regulator/sensory box protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 668.0
  • Bit_score: 1301
  • Evalue 0.0
Sigma-54 dependent transcriptional regulator/sensory box protein {ECO:0000313|EMBL:EIA16130.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 668.0
  • Bit_score: 1301
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2007
ATGTATTCAAGAGAATTGATTATAAAGACGCCCTTAGGATTACACACTAGATACTCTGCTATGATTGTTAATAAGGCTTCTGAAATAGAGTCTAAGTATAAAGTTAAACTCTATATAAAAAAAGAATCCTATACAGATTGGCTTGGAATAAGTATGCTTGCAATACTTTCTCTTAAGGTGTTGCCTAATGAAAGTATATTAATTGGATCTAAAAATGAAGGAATGATTGAAAAGTTAGCTGTTCAATCTCTTCTTGAGTTTATTGATAAAAACATAAATAATCCCATTGAATCTGAGGATAGTGAAATAGATGAAATAATAGATGCTAGCATAGTAGCTAATGAACAGGTTCTTGAAAGTTTGCCAATAGGTATTGTTGTTATAGATATAGATCAAAATATAATAACAATTAATCAATATGCTTTAAGATTTATTGGATGCAATAAAAAAGATGTTAAAGGAAAAAAGATTAATGAAGTTATTCCATCATCTCAGCTTCCTCATGTTATGCTTAGTAATTTAAAAAAGTATGGCTCAACTCTTCATATAAATAACAGAGTTGGCTTAGTAAATAGCTCTCCTCTTTTCATAAACGATAAGATTATAGGGGCTGTAAGTGTTATTCAAGATGTATCTGATATTATAGGTATGAAAGAAATAAATGAGAAATTTACTAAGATACTTGAAAATTCACAGGATATGATTTGCTTTGTAGATGAAAATGGTATAATAAATTATTTAAATCCTGCATATATTAAAAACTTTTCTAAAGTTAGTTCTGATGTTATAGGAAAAAGTATTTTTGATATTGCTCCTAATGGACTTAGAGCTAAAGTATTTAAAGAAAAAACTTTATTAAAAGATGTAATTCATAAGAAAAACGGTATAAATGTTATAAGTACTATTGATCCTTTATTTATTGATGGACAGTTTAAAGGAGTTATTTCTACTTCTAGACCAGTTAGTTTAATTAAAGAACTTATGTCAAAACTAAATAAATCTGAACAGGAATTAGATTATTATAAAAATGAGTTTTTAAGACAGTTATCTAAAAATTCTTCTTTTAATAATATTATAGGTTCAACTAGAACTCTAAAGGATATAATGTACATGTGTCAAAAGGCTTCAGAAACCACATCAACTGTTCTTATTCGTGGTGAAAGTGGTACAGGTAAGGAACTTATTGCAAAGGCTATACACAATAATAGTAATAGAAAAAATAAGCCTTTCGTAAGGGTTAACTGTGCTTCAATTCCTGAAAATCTCTTAGAAAGTGAATTGTTCGGATATGAAAAGGGAGCTTTTACTGGGGCAGTTCAAAGCAAACCTGGTAAATTTGCTATTGCTGATACAGGTACTATATTCTTAGATGAAATAGGTGATATGCCCTTATCAATGCAAGTTAAACTCCTTAGAGTTTTACAAGAAAGAGAGATTGAAAGTGTTGGAGGAATAACTCCTAGAAATATTGATGTGAGGGTTATTGCTGCAACTAATAGAAATTTAGAAGAAATGATTGAAGAGGGTTCCTTTAGAGAGGATCTTTATTACAGACTTAATGTCTTAGGTATTAATCTTCCTCCACTTAGAGAACGTAAAGAAGATATTCCTGAACTAGCCGAACATTTTATAACTAAGCTAAATAAAAAGTTACATAAAACTATATTAGGAATAAAACAAGATGCCCTTAATCTACTAATTGAGTATTCTTGGCCTGGAAATATACGTGAGCTTGAAAATATAATGGAAAGGGCCATAAATCTTTGTGATGGAGATTATATAGATAGTTCTTATCTGCCTTCATATTTAAAGCCAGTTGAATCAAAGTCTTTTAATTTAAATATTGATATTGATCATATACTTCCCTTTGAAGAATATGAAAAACAAATAATAGAAGCAGCTATGAAGAAGTACAAATCCTTTAATAAGGCTGGAAAAGCTTTAGGATTAACTCATAGAACAGTTTCTTTGAAATGTAAAAAGTATAATATAGATGTAAAAAAATAA
PROTEIN sequence
Length: 669
MYSRELIIKTPLGLHTRYSAMIVNKASEIESKYKVKLYIKKESYTDWLGISMLAILSLKVLPNESILIGSKNEGMIEKLAVQSLLEFIDKNINNPIESEDSEIDEIIDASIVANEQVLESLPIGIVVIDIDQNIITINQYALRFIGCNKKDVKGKKINEVIPSSQLPHVMLSNLKKYGSTLHINNRVGLVNSSPLFINDKIIGAVSVIQDVSDIIGMKEINEKFTKILENSQDMICFVDENGIINYLNPAYIKNFSKVSSDVIGKSIFDIAPNGLRAKVFKEKTLLKDVIHKKNGINVISTIDPLFIDGQFKGVISTSRPVSLIKELMSKLNKSEQELDYYKNEFLRQLSKNSSFNNIIGSTRTLKDIMYMCQKASETTSTVLIRGESGTGKELIAKAIHNNSNRKNKPFVRVNCASIPENLLESELFGYEKGAFTGAVQSKPGKFAIADTGTIFLDEIGDMPLSMQVKLLRVLQEREIESVGGITPRNIDVRVIAATNRNLEEMIEEGSFREDLYYRLNVLGINLPPLRERKEDIPELAEHFITKLNKKLHKTILGIKQDALNLLIEYSWPGNIRELENIMERAINLCDGDYIDSSYLPSYLKPVESKSFNLNIDIDHILPFEEYEKQIIEAAMKKYKSFNKAGKALGLTHRTVSLKCKKYNIDVKK*