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NECEvent2014_5_8_scaffold_2809_1

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(2..448)

Top 3 Functional Annotations

Value Algorithm Source
Family transposase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCW1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 304
  • Evalue 8.00e-80
Family transposase {ECO:0000313|EMBL:EDT28377.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 304
  • Evalue 1.10e-79
putative IS transposase (OrfB) similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 150.0
  • Bit_score: 241
  • Evalue 1.40e-61

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 447
ATGATACTATCGAAAAAAGTTAGATTGTATCCAAGTGAAATACAAGAGAAAAAACTTTGGCAGTCAGTTGGTACTGCTAGATTTATATACAATTGGACACTTTCAAAACAAGAAGAAAATTATAAAAATGGTGGAAAATTTATATCTGATGTAATTTTAAGAAAGGAATTAACCAAGTTAAAGAAAAATGAATTAAATTGGTTAAATGAAGTATCTAATAATGTAGCTAAACAAGCTGTAAAAGATGCTTGTAATGCATATAAAAGATTCTTCAATAGATTATCAGATAAACCACGATTTAAGAGTAGAAAAAAGAGTAAAAAATCATTCTACAACGATAATATAAAGCTAAAAGTTAAAGAAAATAGATTAGTTAATATTGAAAAAGTTGGTTGGATAAAAACTAATGAACAACTACCTATTGGAGTTAAATATAGTAATCCTCGT
PROTEIN sequence
Length: 149
MILSKKVRLYPSEIQEKKLWQSVGTARFIYNWTLSKQEENYKNGGKFISDVILRKELTKLKKNELNWLNEVSNNVAKQAVKDACNAYKRFFNRLSDKPRFKSRKKSKKSFYNDNIKLKVKENRLVNIEKVGWIKTNEQLPIGVKYSNPR