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NECEvent2014_5_8_scaffold_3548_3

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 1650..2264

Top 3 Functional Annotations

Value Algorithm Source
LytTr family DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=H7CWM9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 410
  • Evalue 1.10e-111
  • rbh
virR; DNA-binding response regulator, LytTr family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 410
  • Evalue 3.10e-112
LytTr family DNA-binding response regulator {ECO:0000313|EMBL:EIA16780.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 410
  • Evalue 1.50e-111

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 615
ATGTTTAGTATTGCCTTATGTGAAGATAATTCCTTGCAAAGAGAAGAATTAAAAAATAATTTAAGTAAAGTTTTAGATGAAATAGGAGTAGAGTATAAACTTTTAACCTTTGAGACAGGAGAGGATCTATTAAGAGAATATCCAGAAAATTTGGACATGCTTTTTTTAGATATTCAAATGGGTGAGTTAACAGGAATGGAGACTGCTAGAAAGGTTAGAAAGTATGATGATAAAGTTGAGATTATATTTATAACTGCTTTATGGGATTATATTCAAAAAGGTTATGAAGTTCGTGCTTTTAGATATTTAATAAAGCCAGTTAAATTTAAGGAGCTACAAGAGCAGGTTACAGCTTGTGTAGAAAATATTTTACATAAAAGATATACATACATAACAATAAAAGATAAAAATAATGTTTTAAAGATTAGAACAGAAGATATACTTTTTCTTGAGACTTTTGAGAGAAAGGTAATAATACATACTAATTCTCAAGATTATATAGTAAAGATGAGTATGAATAAACTAGAAAAGGAGCTTAATAATAAGGGCTTTTTTAGATGTCATACTAGTTATATTGTAAATTTAATAAAGATAGAAGAGATTAAAAAGGATTAT
PROTEIN sequence
Length: 205
MFSIALCEDNSLQREELKNNLSKVLDEIGVEYKLLTFETGEDLLREYPENLDMLFLDIQMGELTGMETARKVRKYDDKVEIIFITALWDYIQKGYEVRAFRYLIKPVKFKELQEQVTACVENILHKRYTYITIKDKNNVLKIRTEDILFLETFERKVIIHTNSQDYIVKMSMNKLEKELNNKGFFRCHTSYIVNLIKIEEIKKDY