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NECEvent2014_5_8_scaffold_4204_2

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(1084..1839)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 493
  • Evalue 2.60e-137
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 248.0
  • Bit_score: 492
  • Evalue 3.80e-136
tRNA pseudouridine synthase A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP6_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 493
  • Evalue 9.20e-137
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 756
GAAATTAAAATGAGAAATATAAAAATTACTTTAGATTATGATGGGAGTAAGTACAAGGGATGGCAAAAGCAAAACCAAAAGGGAAGTAATGTTTCCACAGTTCAAGATAAATTAGAAAAAGTACTAACTAAAATGACTAGTGAAGAGATTCAACTAATTGGTTGTGGAAGAACTGATAGTGGTGTACATGCAAAAAATTATGTAGCAAATTTTAAGACAAATTCTCTTATGACTCTAGAACAAATTATTGAATACATAAATGAATATTTACCTGAAGATATAAGGGTAAAGGAAATAAGAGAAGCAAGTGAAAGATTTCATGCTAGATTTAATGTTAAGTCTAAAACTTATGAATATACTATTGATAACAATAAGTTCAAAGATGTATTTTTAAGAAAATATGCATGGCATGTTGAAGAAAAGTTAGACCTAGAAGCTATGGAAGAAGGAGCAAAATATTTATTAGGCACTCATGACTTTAAGAGTTTTACAAGTTTAAAATCAAAGAACAAATCAACTTTAAGAACCATAAATAGCATTGGATTTCATGAAAATAATAATATATTAAGTATAAAGATAAATGGAAATGGCTTCTTATTAAATATGGTTAGAATAATAGTAGGAACTTTAGTAGATGTAGGACTTGGAAAAATTGAACCAAAATATATAAATGATATACTTGAAGCGAAGGAAAGAGCAAAAGCTTCAGAGAAAGCACCAGCTCATGGACTTTGTCTTTTAGAATTAAATTATTAA
PROTEIN sequence
Length: 252
EIKMRNIKITLDYDGSKYKGWQKQNQKGSNVSTVQDKLEKVLTKMTSEEIQLIGCGRTDSGVHAKNYVANFKTNSLMTLEQIIEYINEYLPEDIRVKEIREASERFHARFNVKSKTYEYTIDNNKFKDVFLRKYAWHVEEKLDLEAMEEGAKYLLGTHDFKSFTSLKSKNKSTLRTINSIGFHENNNILSIKINGNGFLLNMVRIIVGTLVDVGLGKIEPKYINDILEAKERAKASEKAPAHGLCLLELNY*