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NECEvent2014_5_8_scaffold_5929_1

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 2..955

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFQ9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 294.0
  • Bit_score: 250
  • Evalue 2.90e-63
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC47718.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 294.0
  • Bit_score: 250
  • Evalue 4.10e-63
Membrane protein involved in the export of O-antigen and teichoic acid similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 302.0
  • Bit_score: 242
  • Evalue 1.30e-61

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Taxonomy

Firmicutes bacterium CAG:424 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 954
TGTTATGTTTTCTTTCTTATGGATAAGTTTACATGGGAAAAAGCTATGGTAGTAATATTAATATGTTTATATAAAATGATGGATGGACTTGCAGATGTGTATGAAGGAGCTTTTCAGAAGAATGGAAAGTTACATGTAGCAGGCAAATCATTATCTTTTAGAACAGTAATGACTTCAGTAGCATTTATTTTTACAATAATAATTACTAAAAATTTAATTATTACTTCAGCAGTTACTTTTATTATTGCAGTTATTGGATTTATATTGTTTGATATAAATATTATAACTGCATTTGAAAAAGAAAGAATAAAATTTAGATTTGATAAAATATTAGAATTACTAAAAGAATGTTTTCCGTTTTTTGTTGGATCATTTATGTCTATGTATATATTTAGTGCGGTTAAATATTCAATAGATGGAAACATGGCTTCAAAATATCTAACATACTTTAACATAATATTTATGCCTACATTTACTATAAGTCTATTTAATGGATTTATATTAAAGCCTTTGTTGACGACACTTGCTACAAGCTGGAAAGAAGGAAAAGTACATGAATTTAAAGCTATAATATTAAAGATTCTATTATGTATAGTTGGATTTACTGTTGTAGTGACTATAGGAGCATATTTGTTAGGGGTTCCAGTTTTATCTCTGATATATGGGGTTGATATTTCGCCATATAAGTTTGAATTATTATTGTTACTTGCTGGTGGAGGCATAAGTGCGGCTAGTACAACATTCTATTATTGTTTAACTGTAATGAGAAAGACAAAAAGTATTTTCTTAGGATATATAACTACATTTATTATATCATTTGTATTGCCAAAGTATTTTGTAATGCAATGGGGGATAACTGGTGCAGCGATATGTCATTGTATATTAATGATAATAATGTCTTCTTCATTTGCAGCATTAGCTATAATTAATTTTAAAAATCATATTAATGAATAG
PROTEIN sequence
Length: 318
CYVFFLMDKFTWEKAMVVILICLYKMMDGLADVYEGAFQKNGKLHVAGKSLSFRTVMTSVAFIFTIIITKNLIITSAVTFIIAVIGFILFDINIITAFEKERIKFRFDKILELLKECFPFFVGSFMSMYIFSAVKYSIDGNMASKYLTYFNIIFMPTFTISLFNGFILKPLLTTLATSWKEGKVHEFKAIILKILLCIVGFTVVVTIGAYLLGVPVLSLIYGVDISPYKFELLLLLAGGGISAASTTFYYCLTVMRKTKSIFLGYITTFIISFVLPKYFVMQWGITGAAICHCILMIIMSSSFAALAIINFKNHINE*