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NECEvent2014_5_8_scaffold_4259_1

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 104..670

Top 3 Functional Annotations

Value Algorithm Source
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 188.0
  • Bit_score: 340
  • Evalue 3.60e-91
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Clostridium intestinale URNW RepID=U2N9M9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 185.0
  • Bit_score: 347
  • Evalue 1.00e-92
  • rbh
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KGJ50428.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.; similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 188.0
  • Bit_score: 358
  • Evalue 8.30e-96

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Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGGAATTTTAAGTTTATTGAAACTAAGATAAAGGATTTATATATTATCGAGCCAAAGGTTTTTGGAGATAACAGAGGATATTTTATGGAAACCTATAGCAAGAAAGATTTTGATGAAGCAGGTCTTACTATGACCTTTGTTCAAGATAATGAATCAAAATCTTCAAAGGGTGTATTAAGAGGAATGCATTTCCAAACTAAGCACACTCAAGGTAAATTAGTTAGAGTTACTAAAGGCAGTGTTTATGATGTGGCTGTAGATTTAAGAAAAGGGTCGCCAACTTATGGACAATGGGAAGGGGTATTACTAACTGATGAAAATAAGAAGCAATTTTATGTTCCAGAAGGTTTTGCACATGGATTCTTAGTTCTATCTGATGAAGCTGTATTTAATTATAAATGCACTGATTTCTATGCACCTGAATATGATGGCGGATTATTATGGAATGATCCAGATGTAGGAATAGAATGGCCATTAGAAGGAATAGAAGAAGTTCTTTTATCTGAAAAAGATAAAAAACAAAAGAGGTTAAAAGAATTAGATTTACCATTTGAATATAAATAA
PROTEIN sequence
Length: 189
MGNFKFIETKIKDLYIIEPKVFGDNRGYFMETYSKKDFDEAGLTMTFVQDNESKSSKGVLRGMHFQTKHTQGKLVRVTKGSVYDVAVDLRKGSPTYGQWEGVLLTDENKKQFYVPEGFAHGFLVLSDEAVFNYKCTDFYAPEYDGGLLWNDPDVGIEWPLEGIEEVLLSEKDKKQKRLKELDLPFEYK*