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NECEvent2014_6_2_scaffold_2388_2

Organism: NECEvent2014_6_2_Staphylococcus_epidermidis_32_4_partial

partial RP 30 / 55 BSCG 25 / 51 ASCG 5 / 38
Location: comp(413..1093)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 471
  • Evalue 1.20e-130
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 471
  • Evalue 6.20e-130

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
GTACGAATTCATCCCTCAAGCAGAACAGACAGGGGTGTGCATGCGTATCAGCAATTCTTTCATTTCGATACCGAATTGAATATTGATAACAAACAATGGCAATATGCGATGAATCGAGCTTTACCAGATGATATTTACGTTAAAAATGTACGAAATGTCGACGAGTATTTTCATTGTCGTTATGACTGCGTAGGCAAACGCTATCGTTACAAAGTTTATCAAGGTAATCATCGAAATCCTTTTAAGAGTGGTACTGAAACATTTGTTAATGAAACATTAGACTATGATAAAATGAACAAAGCTGCTCAAGAATTTATAGGTACACATGATTTTACCGGTTTTTGTTCACAGAAAACAGAAGTTGAAAGCAAAGTAAGAACACTATATCAGAGTGAAATTGTTGCTACTAAAGAAGGGTTTGATTATGTCGTAACAGGTTCTGGATTCCTTTATAATATGGTCCGTGTATTGGCAGCTTTCTTAATTGAAGTAGGAAAAGGAAAGCGTGAACCTAATGACGTCCCTAAGCTCTTAGAGGACAAAAATAGAAATAATGTGCCTCTCACAGCTCCACCTGACGGATTATATTTAGAAAAGATTTATTTAAGCCCAGAAGAATTGATACAAGAATATGGGAAAGATGTAAAAATACACTACAAAAAATCGTTGGAAAAACACTAA
PROTEIN sequence
Length: 227
VRIHPSSRTDRGVHAYQQFFHFDTELNIDNKQWQYAMNRALPDDIYVKNVRNVDEYFHCRYDCVGKRYRYKVYQGNHRNPFKSGTETFVNETLDYDKMNKAAQEFIGTHDFTGFCSQKTEVESKVRTLYQSEIVATKEGFDYVVTGSGFLYNMVRVLAAFLIEVGKGKREPNDVPKLLEDKNRNNVPLTAPPDGLYLEKIYLSPEELIQEYGKDVKIHYKKSLEKH*