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NECEvent2014_6_3_scaffold_152_15

Organism: NECEvent2014_6_3_Klebsiella_oxytoca_56_99_partial

partial RP 22 / 55 MC: 5 BSCG 19 / 51 ASCG 10 / 38 MC: 3
Location: comp(15271..18834)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1328430 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2347
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2273
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3564
ATGTTTGCGATACGGGTTGGCGAATCCGGGTCGATCGCGGATAATCTCACTATTGAATATCAGCGAGTTGCCCTCCATATCGGCAGAGCGAATACCCAAGAGATCATGATACCGTCTATGCCTGAACAATACCGATACTCTCTGCCGGTTAAAGCCGGCGATCAGCGCCAGATTGGCGAACTGACCGGCGCGGCCTGCGCCACTCTGGTGGCGGAAATGGCCGAGCGCCACGGCGGACCGGTGGTACTGATTGCCCCCGATATGCAAAACGCCCTGCGTCTGAATGATGAAATCAGGCAGTTTACCGATAGCATGGTGGCGGGCCTGGCGGATTGGGAAACCCTCCCCTACGATAGCTTTTCCCCGCACCAGGACATTATCTCTTCCCGTCTCGCCACCCTGTACCAGCTCCCGACCATGGAACGCGGCGTACTGATTATCCCGGTCAGCACCCTGATGCAGCGCGTCTGTCCGCATAATTTCCTCCACGGCCACGCGCTGGTGATGAAAAAAGGCCAGCGCCTGTCGCGGGATGCGCTGCGCTCCCAGCTGGATAGCGCCGGCTATCGTCACGTCGACCAGGTGATGGAGCACGGCGAGTACGCCACGCGCGGCGCATTGCTTGACCTGTTTCCTATGGGCAGCGAGCAGCCCTACCGTCTCGATTTTTTTGATGATGAGATAGACAGCCTGCGTCTGTTCGACGTCGACAGCCAGCGTACGCTGGAGGAAGTCGCCAGCATTAACCTGCTTCCGGCGCACGAATTCCCGACGGATCAGGCCGCTATCGAGCTATTCCGCAGCCAGTGGCGCGACCGCTTTGAGGTCAAACGCGACGCCGAGCATATTTATCAGCAGGTCAGTAAAGGCACGCTGCCCGCGGGAATCGAATACTGGCAGCCGCTGTTCTTTAACGAGCCGCTGCCGCCGCTGTTCAGCTATTTCCCGGCGAAAACGCTGATCGTTAATACCGGCGATCTGGAGGCCAGCGCCGAACGCTTCCAGAACGAAACCCGCGCCCGCTTTGAAAACCGCGGCGTCGACCCGATGCGCCCGCTTTTGCCGCCGGAACAGCTGTGGCTGCGCAGCGATGAGCTGTTTAGCGAGCTCAAAAAATGGCCGCGCGTCCAGCTCAAAACCGAGCGTCTAGCGGAAAAAGCCGCCAACACCAATCTCGGTTATCAGAAATTACCCGAGCTGGCGATCCAGGCGCAGAACAAAGCGCCGCTGGATAACCTGCGCCGATTCCTCGAGTCCTTCAGCGGGCCGGTGATTTTTTCGGTCGAGAGCGAGGGGCGTCGAGAGGCGCTTGGCGAAATGCTGGCGCGTATTAAGATCGCGCCAAAGCATATCCTGCGTCTTGAAGAGGCGACGGGTAATGGCCGCTATCTGATGATCGGCGCCGCCGAGCATGGTTTCGTCGATAGCCAGCGTAATCTGGCGCTGATTTGCGAAAGCGACCTGCTGGGCGAGCGCGTCGCGCGCCGTCGTCAGGACTCTCGCCGCACCATCAATCCCGATACGTTGATTCGTAACCTGGCGGAGCTGCATATCGGCCAACCGGTGGTGCATCTTGAGCATGGAGTTGGGCGCTACGCCGGAATGACCACCCTTGAAGCGGGCGGCATCAACGGCGAATACCTGATGCTGACCTACGCCAACGATGCCAAACTGTACGTGCCGGTGTCGTCGCTGCATCTGATTAGCCGCTATGCGGGCGGCGCGGAAGAGAATGCGCCGCTGCATAAACTGGGCGGCGACGTCTGGGCGCGGGCGCGGCAGAAAGCGGCCGAGAAAGTGCGCGACGTGGCCGCCGAACTGCTGGATATCTACGCTCAGCGTGCGGCGAAAGCGGGCTACGCGTTTAAACATGATAAAGAGCAATATCAGCTGTTCTGCGACGGCTTCCCGTTCGAGACCACGCCCGATCAGGCGCAGGCTATTAACGCCGTACTAAGCGATATGTGTCAGCCGCTGGCGATGGACCGTCTGGTGTGCGGCGATGTCGGCTTCGGCAAAACGGAAGTGGCGATGCGCGCCGCGTTTCTGGCGGTTGAAAACCATAAGCAGGTGGCGGTGCTGGTGCCGACCACCCTGCTCGCCCAGCAGCACTTCGATAACTTTCGCGATCGCTTCGCCAACTGGCCGGTGCGCATCGAGATGCTCTCGCGCTTTCGTAGCGCCAAAGAGCAGGCGCAGATCCTCGAGCAGGTCGCGGAAGGGAAAGTCGATATTCTTATCGGCACCCATAAACTGCTGCAGCCGGACGTTAAGCTGCGCGATCTCGGCCTGCTGATTGTTGATGAAGAGCACCGCTTCGGCGTGCGCCATAAAGAGCGCATCAAGGCGATGCGCGCCGACGTCGATATCCTGACCCTGACCGCCACGCCTATTCCGCGTACGCTGAATATGGCGATGAGCGGTATGCGCGATCTGTCGATCATCGCCACCCCGCCCGCCCGCCGTCTGGCGGTCAAAACCTTCGTCCGCGAATATGACGCGCTGGTGGTCCGCGAGGCGATCCTGCGTGAGGTACTGCGCGGCGGCCAGGTTTACTACCTCTATAATGACGTGGAAAACATCCAGAAAGCCGCCGAGAAGCTGGCGGAGCTGGTGCCGGAAGCGCGCATTACCATCGGTCACGGCCAGATGCGCGAGCGCGAACTCGAACGGGTGATGAACGATTTCCATCACCAGCGCTTTAACGTGCTGGTGTGCACCACCATTATCGAAACCGGGATCGACATTCCAACGGCGAACACCATTATTATTGAGCGCGCCGATCACTTCGGTCTCGCACAGCTGCACCAGCTGCGCGGTCGCGTCGGTCGTTCGCACCATCAGGCTTATGCCTGGCTGCTGACGCCGCATCCGAAGGCGATGACCACCGATGCGCAAAAACGCCTTGAGGCTATTGCATCGCTGGAAGATCTCGGCGCTGGCTTCGCTCTGGCAACGCATGACCTCGAAATTCGCGGCGCGGGTGAACTGTTGGGCGAGGATCAGAGCGGTTCCATGGAAACCATCGGCTTCTCCCTCTATATGGAGCTGCTGGAAAATGCCGTTGACGCGCTGAAAGCAGGCCGCGAACCCTCGCTGGAGGATCTTACCAGTCAGCAGACCGAAGTTGAGCTACGGATGCCGTCGCTGCTGCCGGATGACTTTATCCCGGATGTGAATACGCGCCTGTCGTTCTACAAACGCATTGCCAGCGCGAAGAACGAGAATGAGCTGGAGGAGATCAAAGTCGAGCTTATCGATCGCTTTGGCCTGCTGCCCGACCCGGCAAGAAACCTGCTCGATATCGCCCGACTGCGCCAGCAGGCGCAGAAGCTGGGGATCCGCAAGCTGGAGAGCAACGAAAAGGGCGGCACCATTGAGTTTAACGAGAAGAATAACGTGAATCCGATGTGGCTGATTGGCCTGTTGCAAAAGCAGCCTCAGCACTATCGCCTGGATGGCCCAACGCGCCTCAAGTTTACGCAGGACCTTGCCGAGCGTAAAACGCGGATGGAGTGGGTGCGCCAGTTTATGCGCCAGCTCGAAGAGAACGCCGCCGCCTGA
PROTEIN sequence
Length: 1188
MFAIRVGESGSIADNLTIEYQRVALHIGRANTQEIMIPSMPEQYRYSLPVKAGDQRQIGELTGAACATLVAEMAERHGGPVVLIAPDMQNALRLNDEIRQFTDSMVAGLADWETLPYDSFSPHQDIISSRLATLYQLPTMERGVLIIPVSTLMQRVCPHNFLHGHALVMKKGQRLSRDALRSQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDVDSQRTLEEVASINLLPAHEFPTDQAAIELFRSQWRDRFEVKRDAEHIYQQVSKGTLPAGIEYWQPLFFNEPLPPLFSYFPAKTLIVNTGDLEASAERFQNETRARFENRGVDPMRPLLPPEQLWLRSDELFSELKKWPRVQLKTERLAEKAANTNLGYQKLPELAIQAQNKAPLDNLRRFLESFSGPVIFSVESEGRREALGEMLARIKIAPKHILRLEEATGNGRYLMIGAAEHGFVDSQRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGINGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDVWARARQKAAEKVRDVAAELLDIYAQRAAKAGYAFKHDKEQYQLFCDGFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQVAEGKVDILIGTHKLLQPDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDALVVREAILREVLRGGQVYYLYNDVENIQKAAEKLAELVPEARITIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLESNEKGGTIEFNEKNNVNPMWLIGLLQKQPQHYRLDGPTRLKFTQDLAERKTRMEWVRQFMRQLEENAAA*