ggKbase home page

NECEvent2014_6_3_scaffold_29_31

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: comp(28867..29481)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 203.0
  • Bit_score: 251
  • Evalue 1.80e-64
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABR32774.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerin similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 203.0
  • Bit_score: 251
  • Evalue 9.10e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 615
ATGACGAGGGATAAAAGTGGAAGCAGTAAAGTAGGGGAAAAGAAAAGAAAAAAAGAAACAGAACTATTTTCTGCTGCATATGAACTGTTTACTACAAAAGGCACACAGAATACAGCAATAGATGACATAGTTAAGAGAGCTGGGGTAGCAAAAGGAACATTTTATCTATACTTTAAAGATAAGTATGACATAATCAATAGGCTTATACTTCAAAAAAGTTCTCAAGTTATAAAAGAAGCAGTAGAAAAAACTGAAGAACAAAAATTAGATAGGTTTGAAGACAGAACATTATTTTTTATTGACTATGTTATTAATTACTTTAAAGAAAATAAACTTATGCTAAAGCTAATTAATAAAAATTTCTCCTGGGGACTATTCAGAAGAGCATTAAGAAATCCAGAGCAATATAAGGAAATGGAGGGGATAGTAGAAATCTTTATAGGAAATCTAGTTGAAAAAAATATGAATTTAGATGAAGCGGAATTGACATTGTTCATGATATTTGAGTTAGTAGGTAGTGTTTGTTATAGCTCTATAATTTTAGAAGAACCTACAACTATAGATGAAATTAAGCCAATTCTCTTTAAGAAAGTTTTAGCTATGATAAGTTACTAA
PROTEIN sequence
Length: 205
MTRDKSGSSKVGEKKRKKETELFSAAYELFTTKGTQNTAIDDIVKRAGVAKGTFYLYFKDKYDIINRLILQKSSQVIKEAVEKTEEQKLDRFEDRTLFFIDYVINYFKENKLMLKLINKNFSWGLFRRALRNPEQYKEMEGIVEIFIGNLVEKNMNLDEAELTLFMIFELVGSVCYSSIILEEPTTIDEIKPILFKKVLAMISY*