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NECEvent2014_6_3_scaffold_54_32

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: comp(27518..28906)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=457396 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 482.0
  • Bit_score: 737
  • Evalue 9.40e-210
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 478.0
  • Bit_score: 708
  • Evalue 1.20e-201

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1389
TTGACCAAAGAACAATACGAGGATATGACTTTAGTAGAGTTAAAAGAAGTGGCTAAGTCATTAGAAATTAAGAACATATCAAAGTTAAAAAAGAGTGAACTTATAGATCAAATAATAGCAACAAAAGCTCATGCAATAAAAAAGGATGGGGTAGTTTTAAGAGAGAAGATTTCTCCTAAAAATAATGTTGTTAATAGTACTAATAGGGAAGAAGTAAGAAGTAGTGAGAAAAAAGAAGAGCTGAAAGCTATGATAAATGATTCTCATATGGCTAGAGGAATACTTGAAATATTAGAAAATAATAATTTTGGATTTTTAAGATGTAAAAATTATTTAACAAGTAGTGAAGATATATATGTTTCTCCATCCCAAATAAGAAGATTTAACCTGAAAACTGGAGATGAAGTTATTGGGAAGGTTAGAGAAGCTAAAGAGGGAGAAAAGTTTAAAGCTTTATTATACGTTGAAAAGGTAAATGGAGAACATCCTGAGAAGGCTATAGGAAGAAGAGCTTTTGAAAATTTAGTTCCAATATATCCAGCAGAAAGAATTAGATTAGAGGGAAGTAATCCTTTAGATTTATCATCTAGAATGATGGATATAATATGTCCTATCGGTAAAGGACAAAGAGGAATAATCGTAGCACCTCCTAAGGCAGGTAAAACTACACTTTTAAAAAAGATTGCTCAAAGTATAACTAATAATAACCCAGAAGTTGTATTGATAGTGTTACTTATAGATGAAAGGCCAGAAGAAGTTACTGATATGCAAAGAAGTATAAATGGAGAGGTAATTTATTCTACATTTGATGAAGAACCGCAAAATCATGCAAAAGTATCACAAATAGTTTTAGAAAGAGCTAAGAGAATAGTTGAGCAAGGTAAGGATGTCGTAATCCTATTGGATTCTTTAACAAGGTTATCAAGAGCATATAACTTAACTATTACTCCAACAGGAAGAACTTTATCAGGTGGGTTAGATCCAGGAGCATTAATTATGCCTAAGAAGTTCTTCGGAGCTGCTAGAAATATAGAAGGAGGCGGTAGCTTAACAATATTAGCTACAGCACTTGTTGATACAGGTTCAAGAATGGATGATATGATATTTGAAGAATTTAAGGGTACTGGTAATATGGAAGTACACTTAGATAGAAAGCTTCAAGAGAGAAGAATATTCCCTGCTATAGATATTTATAAGTCTGGTACAAGAAAAGAAGATCTATTATTAACAGATGAAGAAAAAGAAGTGGCATATTCAATTAGAAAAGTTATGTACAGAGATGGAAATATTGAGAATATAACAGAGAAGCTAATTAATATGTTATCCAAAACAAAAAACAATAAAGAATTTATACGTATATTTGAAAAAAGTGATATAGATAAGAAATAA
PROTEIN sequence
Length: 463
LTKEQYEDMTLVELKEVAKSLEIKNISKLKKSELIDQIIATKAHAIKKDGVVLREKISPKNNVVNSTNREEVRSSEKKEELKAMINDSHMARGILEILENNNFGFLRCKNYLTSSEDIYVSPSQIRRFNLKTGDEVIGKVREAKEGEKFKALLYVEKVNGEHPEKAIGRRAFENLVPIYPAERIRLEGSNPLDLSSRMMDIICPIGKGQRGIIVAPPKAGKTTLLKKIAQSITNNNPEVVLIVLLIDERPEEVTDMQRSINGEVIYSTFDEEPQNHAKVSQIVLERAKRIVEQGKDVVILLDSLTRLSRAYNLTITPTGRTLSGGLDPGALIMPKKFFGAARNIEGGGSLTILATALVDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPAIDIYKSGTRKEDLLLTDEEKEVAYSIRKVMYRDGNIENITEKLINMLSKTKNNKEFIRIFEKSDIDKK*