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NECEvent2014_6_3_scaffold_224_11

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: comp(7675..11181)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1561 species="Bacteria; Firm similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 999.99
  • Bit_score: 1741
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1740
  • Evalue 0.0

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3507
ATGAGGTTGAGAGGGTTAATGGAACCCTTAATAAGTAGTGAAGAATTTATTGAGCTGGAATCATATATAAAAGGTGATAAACATCCTATAGAAATTGAAGGATTATCGGAATCAGGTAAATCCTATGTGATAAATGGAATATATGAAGTTAGTAACAAACCTGTTGTTATAATAACTAATAGCGATATGGAAGCTAAGAATTTATATGAAGATTTAAATTTATATTTAAGCAATGTATATTATTTCCCAGCTAAAGAAATAGTGTTTTATAATGTTGATGCAATTTCAGGAGATCTAAGATGGGCAAGGCTAAATGTAATAAAAGAAATATTATCAAATAATAAAAATATAATAGTAACATCAATTGATGCATTTGCAGCTAGATATACTCCAAAAGATCTTTTTAAAACACATACAGTTAGTATTAGTGTAGGTGATGAGGTTGATTTTAAGGAGTTATCTAAGATACTTGTTGAAGCAGGTTATGATAGAGTTGATGTTGTAGAGGGAAAAGGAGAGTTCTCACTTCGTGGAGGGCTCTTAGACTTGTTCCCTACAAATTCTATATATCCATATAGAATTGAATTGTTTGGTGATGAAATAGATTCTATAAGAACCTTTAATACAGAATCTCAAAGAAGTATTGAGAAAGTTAATTGTATCGAAGTTTTCCCTGCAAAAGAAATTATAATAGATGATGAAATTATAGATTATGCATTAAGTAACATTAGAGAAGAATTAGACTTAACATTAAAGAATAATAAGGATAAAGAAAGAGGTATTAAGTTAAATACTATTATTTCTAAGAACTTGGAAGAGCTAAGAGAAACTCATGATTTTGAAACTATAGATAGCTATTTACCATTGTTCTATAAGAAGAGTGAGAGTTTATTTGACTACTTAGAAGATTATATATTTGTTCTTGATGATAAGGTAAGATGTCTGGGTAAGTTAGATAGTACCTACTTAGAGTTTAATGAAAATTACTCTATTTTTCTTCAAAGGGGAGATATACTACCTTCTCAAGGAAAACTATTACTTGAGAAAGAAGAACTTATTGACTTATTAGAAGAAAAGATAAATATTACTATGGATGCAATTAATAAGGGAGGGGGATTCTTATCCCCTATAAGGAAGATAGAGATTAATTCTGCTATTTTGCATCATTATCAAGGTCAATTGGATTTGCTAATTGAAGATATTTTAAAGAAGAAAAAAGACGGATATAGAACAGTTATATTATCAGGTACACGAGTTAGAGGAGAAAGGCTCGTTTCTACACTTAGAGAAAGAGAAATAGAGAGTAGTTATAGAGATAATATTGAATCTATAGCATTAGGAGAAGTTGTTATAACATTTGGAAATTTATTAAAGGGATTTGAGTGCCCTAAGTATAAAACCTGCGTGATATCAGACAAAGAGGTATTTGGAGAAGCTAAAAGAAAGCTGTCTAAAAGCAAAAGTAAGAGCAAAGGTGTATCTAAAATAAAAAGCTTTGCTGAATTAAAACCTGGAGATTATGTAGTACATGTAAACCATGGAATAGGTGTATATAAGGGGATTAAACAAATAGAGGTTAGTGGACATAAGAGAGATTATCTAGATATTGTATATGATAAAGGTGATAAGTTATATGTGCCTGTTGATCAATTAGATTTAGTCCAAAAGTATATTGGAAGTGAGGGAAAATCCCCTAAAGTAAATAAACTAGGTGGAGCAGAGTGGCAAAAGGCTAAGAGTAAAGTTAAAAAATTTATCAATGAAATTGCAGAGGATTTAGTAAAACTTTATGCTGCAAGAGCTGCGGTTAAGGGATATAAATATTCAAAGGATACAGAATGGCAAATGCAGTTTGAGGATGAATTCCCGTTCCAAGAAACACCTGATCAACTATCATCAATAGAAGAAATTAAGAAGGATATGGAATCAGACAAACCAATGGATAGATTACTTTGTGGTGATGTTGGGTATGGAAAAACAGAGGTTGCTTTAAGAGCAGCATTTAAAGCTGTAATGGAAGGGAAACAAGTAGCATTTCTTGTTCCTACTACAATATTAGCTGAGCAGCATTATAAAAATATGATTAAGAGATTTTCAGATTTTCCAATTAAAATAGATATGGTAAGTAGATTTAGAACTACTAAGGAACAAAAAAGTACTTTGCAATCTGTAAAAGAAGGTAATGTAGATATTTTAGTTGGAACTCATAGATTGGTTTCTAAAGATATAGTATTTAAAGATCTAGGGCTATTAATAGTAGATGAGGAGCAACGATTTGGTGTTGCACAAAAAGAGAAAATTAAGAATCTAAAGAAGAATGTAGATGTTCTTACTTTAAGTGCTACCCCTATTCCGAGAACATTACATATGTCTTTAACTGGTGTTAGGGATATATCTGTAATAGAGACACCACCAGAGGAACGTTATCCTATACAAACTTATGTTGTTGAGCAGAATGATCAATTAATTCGAGATGCAATTATGAGAGAAATAGGTAGAGGTGGTCAAGTATACTTTGTATACAATAGGGTAGAGGATATTGAAAAAATAGCTAACTACATTAAAAATCTTGTTCCTGAAAGTAGAGTTGGAGTAGCTCATGGACAAATGACAGAAAGACAATTAGAAAAAGAAATGCTAGATTTTATGACTAATGAATATAATGTACTTGTATGTACAACTATAATTGAAACTGGAATTGACATTCAGAATGTAAATACAATTATTATATATAATGCAGATAAAATGGGATTATCTCAGTTATATCAGTTAAGAGGAAGAGTTGGTCGTTCTAATAGAATAGCATATGCTTACTTATTATATACAAAGGATAAAGTTTTAACTGAGGTTGCAGAAAAAAGGCTAAAAGCTCTTAAAGACTTTACTGAGTTAGGTTCGGGCTTTAAGATAGCTATGAGGGATCTTGAAATTAGAGGTGCTGGAAACATGATGGGATCTGCACAGCATGGACATATGGCTGCTATAGGATATGACTTGTATTGTAGAATGCTAGAAGATACAGTGAAACTAATTAAGGGTGATATTGATAAAGAACCTATAGAGACAACGGTGGACTTAAAAGTTGATGCATATATTCCATCATCATATATAGAAGATGAGATGCAAAAAATAGAAGTATATAAAAAGATTGCAGCTATAGAAAGCATAGACGAGTATATGGATATAAAAGAGGAGCTAGAGGATAGATATTCAGATATTCCAGATCCTGTTTATAACTTAATGGATATTGCATACATAAAGAGTAGAGCTAAGTTATTATCCATAGAAGAAATAAAAGAAAGCGGAAATGATGTTAGCTTTAGATTCCAAGCAGGAGACAGTGATTACGAGAAGATATTTAAAATAATAATAGAGAAGTATAAAGATAGTATAATGCTGAAGTTTGGGGAAGCACCATCCTTTATATTTAAGCTAAAAGATCAAAAGAAAGAAAACATGTTAGCTTTCTTTAAAGAGATGTTAGAAAATTTAATAAAAAATAAATAA
PROTEIN sequence
Length: 1169
MRLRGLMEPLISSEEFIELESYIKGDKHPIEIEGLSESGKSYVINGIYEVSNKPVVIITNSDMEAKNLYEDLNLYLSNVYYFPAKEIVFYNVDAISGDLRWARLNVIKEILSNNKNIIVTSIDAFAARYTPKDLFKTHTVSISVGDEVDFKELSKILVEAGYDRVDVVEGKGEFSLRGGLLDLFPTNSIYPYRIELFGDEIDSIRTFNTESQRSIEKVNCIEVFPAKEIIIDDEIIDYALSNIREELDLTLKNNKDKERGIKLNTIISKNLEELRETHDFETIDSYLPLFYKKSESLFDYLEDYIFVLDDKVRCLGKLDSTYLEFNENYSIFLQRGDILPSQGKLLLEKEELIDLLEEKINITMDAINKGGGFLSPIRKIEINSAILHHYQGQLDLLIEDILKKKKDGYRTVILSGTRVRGERLVSTLREREIESSYRDNIESIALGEVVITFGNLLKGFECPKYKTCVISDKEVFGEAKRKLSKSKSKSKGVSKIKSFAELKPGDYVVHVNHGIGVYKGIKQIEVSGHKRDYLDIVYDKGDKLYVPVDQLDLVQKYIGSEGKSPKVNKLGGAEWQKAKSKVKKFINEIAEDLVKLYAARAAVKGYKYSKDTEWQMQFEDEFPFQETPDQLSSIEEIKKDMESDKPMDRLLCGDVGYGKTEVALRAAFKAVMEGKQVAFLVPTTILAEQHYKNMIKRFSDFPIKIDMVSRFRTTKEQKSTLQSVKEGNVDILVGTHRLVSKDIVFKDLGLLIVDEEQRFGVAQKEKIKNLKKNVDVLTLSATPIPRTLHMSLTGVRDISVIETPPEERYPIQTYVVEQNDQLIRDAIMREIGRGGQVYFVYNRVEDIEKIANYIKNLVPESRVGVAHGQMTERQLEKEMLDFMTNEYNVLVCTTIIETGIDIQNVNTIIIYNADKMGLSQLYQLRGRVGRSNRIAYAYLLYTKDKVLTEVAEKRLKALKDFTELGSGFKIAMRDLEIRGAGNMMGSAQHGHMAAIGYDLYCRMLEDTVKLIKGDIDKEPIETTVDLKVDAYIPSSYIEDEMQKIEVYKKIAAIESIDEYMDIKEELEDRYSDIPDPVYNLMDIAYIKSRAKLLSIEEIKESGNDVSFRFQAGDSDYEKIFKIIIEKYKDSIMLKFGEAPSFIFKLKDQKKENMLAFFKEMLENLIKNK*