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NECEvent2014_6_3_scaffold_306_15

Organism: NECEvent2014_6_3_Clostridium_paraputrificum_29_53

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 16 / 38 MC: 1
Location: comp(13082..13855)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EHI98313.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL- similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 223.0
  • Bit_score: 269
  • Evalue 6.90e-69
ywqC; capsular polysaccharide biosynthesis protein YwqC similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 224.0
  • Bit_score: 262
  • Evalue 1.00e-67

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Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
ATGTATTGCTTATTAACAAATATAGTTCTTAGTGTTAAAATAAAAAATGGATGCATATTAGACAATATAATGTTAAGATTTGTGGAGGATAATGGAATGAACGAAGAAAACATCAAAATTAAAGATATAATAGATGGGCTGAAAAAGAGATGGCAATTAATAGTTACAATAACTCTTATAGCAACAATTATATCTGCTGTTGTAAGCTTTTTTATAATAAAACCTAAATATGAAGCATCAGCAAAACTATTTGTTGGTAAGGAAGCTACAACAGAAAACTATAATAATAGCGATATAACAATGTATCAACAATTAGTAAAAACATATACAAGCCTTATAAAAACAGAAGATTTAATTAGTAAGGCATTAAAGGATAATAATATAGATTTAGATCCTAAGATAGTAGTATCGAAATTATCTGCAGAACAAATAACAAATACCCAATTAATGCAAGTAAAGTACATAAGTAAAAATAAAGAAGAAGCAGCTAATGTAGTAAAGGCAGTAACAGATGAATTTATTAAAGAGTCATCAGCATTAATAAAGAATGCAGATGTAAAGATAATTGAAAGTGTGAAGCTACCTGAAAAACCAGTAAGTCCAAATAAAAAAATGAATATAGCAATAGCTATGTTACTAGGTTTAATGGTTGGAGTTGGACTAGCGTTATTATTAGAGTTTATGGATAATACATTTAAGGACAAAGAATCATTAGAAGATATTATAGGAGTACCTGTTTTAGGTGCTATTCCAGATCAAGAAAAGGTTAAATAA
PROTEIN sequence
Length: 258
MYCLLTNIVLSVKIKNGCILDNIMLRFVEDNGMNEENIKIKDIIDGLKKRWQLIVTITLIATIISAVVSFFIIKPKYEASAKLFVGKEATTENYNNSDITMYQQLVKTYTSLIKTEDLISKALKDNNIDLDPKIVVSKLSAEQITNTQLMQVKYISKNKEEAANVVKAVTDEFIKESSALIKNADVKIIESVKLPEKPVSPNKKMNIAIAMLLGLMVGVGLALLLEFMDNTFKDKESLEDIIGVPVLGAIPDQEKVK*