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NECEvent2014_6_4_scaffold_399_10

Organism: NECEvent2014_6_4_Clostridium_perfringens_28_108

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(9686..10426)

Top 3 Functional Annotations

Value Algorithm Source
DNA-bindng response regulator, AraC family {ECO:0000313|EMBL:EDT72024.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 485
  • Evalue 5.90e-134
DNA-bindng response regulator, AraC family {ECO:0000313|EMBL:EDT72024.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 485
  • Evalue 5.90e-134
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 246.0
  • Bit_score: 483
  • Evalue 4.50e-134

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGGTTGCTGATGATGAACAATTAGAAAGAAGAGTTTTAACCTCTATATTGAAAAAGAATGTAAGAGTTAAAGAAATTATTGAAGCAAAAAATGGAAAAGAAGCTTTAGAATTAAATAGAGAATTTAATCCAGATATAATAATAATGGATATAAAGATGCCAGGAATAAATGGCATTAAAGCCTTAGAGCTTATAAAAAATGAAAATCCTAACAAGGAAATAATAATGCTTACAGCATATGATGATTTTGAGTTTATACACAAAGTTTTAGTGTTAGGAGGATCGGACTACATAATAAAACCAATAAAACCAGATAAATTAATGGAAATTGTTGATAATATTATGGATAAGATTGAAAATAAGAATATAGAATTAGGAGTAAAAAATCATAGTGATGAAAAGACTCTAGATAGAAACTTAACAAATGAAGAGAAAATAGTAGATAAGGTTTCTAAGTATATTGATGATAATATGGATAAAATGCTGAAGTTAGAAGAATTAGCTTCAATCTGTAATTTAAGCCCAGGGTATTTTAGTAGGGTTTTTAAAAAGGAAACTGGCAAAACTGTAATAACATATATAAATGAGAAAAAGGTAGAAAGAGCAAAGAAACTTTTAAAAGAAAGTAAAGACCCTATAATCAATATATCCTTAGACTTAGGTTTTGATGATTGTGGGTATTTTATAAGGGTATTCAAAAAGATAACAGGCTTAACTCCTAAGGCTTTTAGAGAAGAATAA
PROTEIN sequence
Length: 247
MVADDEQLERRVLTSILKKNVRVKEIIEAKNGKEALELNREFNPDIIIMDIKMPGINGIKALELIKNENPNKEIIMLTAYDDFEFIHKVLVLGGSDYIIKPIKPDKLMEIVDNIMDKIENKNIELGVKNHSDEKTLDRNLTNEEKIVDKVSKYIDDNMDKMLKLEELASICNLSPGYFSRVFKKETGKTVITYINEKKVERAKKLLKESKDPIINISLDLGFDDCGYFIRVFKKITGLTPKAFREE*