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NECEvent2014_6_4_scaffold_699

Alias: 176_004_scaffold_699

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_699_trna_1
unknown

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90..176
DNA (87bp)
transferRNA
NECEvent2014_6_4_scaffold_699_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(599..1090)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
folA; dihydrofolate reductase (EC:1.5.1.3)
NECEvent2014_6_4_scaffold_699_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1090..1881)
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thyA; Thymidylate synthase (EC:2.1.1.45)
NECEvent2014_6_4_scaffold_699_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1997..3643
DNA (1647bp) protein (549aa)
dnaX; DNA polymerase III, subunit gamma and tau (EC:2.7.7.7)
Putative DNA polymerase III, gamma and tau subunit {ECO:0000313|EMBL:CDG02866.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
Putative DNA polymerase III, gamma and tau subunit {ECO:0000313|EMBL:CDG02866.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_6_4_scaffold_699_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3710..4054
DNA (345bp) protein (115aa)
Nucleoid-associated protein CCH01_000160 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
Nucleoid-associated protein CCH01_000160 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
DNA-binding protein, YbaB/EbfC family
NECEvent2014_6_4_scaffold_699_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4122..4718
DNA (597bp) protein (199aa)
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_6_4_scaffold_699_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4929..5207
DNA (279bp) protein (93aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08223.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Uncharacterized protein {ECO:0000313|EMBL:KIL08223.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_4_scaffold_699_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5227..5502
DNA (276bp) protein (92aa)
Putative Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:CDG02860.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Putative Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:CDG02860.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
bofA; pro-sigmaK processing inhibitor BofA family protein
NECEvent2014_6_4_scaffold_699_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5885..6799
DNA (915bp) protein (305aa)
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY83476.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su
ABC transporter family protein {ECO:0000313|EMBL:AIY83476.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su
NECEvent2014_6_4_scaffold_699_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6799..7368
DNA (570bp) protein (190aa)
ABC-2 transporter family protein
ABC-2 transporter family protein {ECO:0000313|EMBL:AIY82760.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
ABC-2 transporter family protein {ECO:0000313|EMBL:AIY82760.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
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