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NECEvent2014_6_4_scaffold_50

Alias: 176_004_scaffold_50

Search features with annotation key words

Displaying items 61-90 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_50_60
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

61973..63070
DNA (1098bp) protein (366aa)
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFE58048.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFE58048.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W
GGDEF domain-containing protein
NECEvent2014_6_4_scaffold_50_61
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

63265..64026
DNA (762bp) protein (254aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58047.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE58047.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_50_62

Not on your lists

64042..64536
DNA (495bp) protein (165aa)
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ETJ18284.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Membrane protein {ECO:0000313|EMBL:ETJ18284.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_50_63
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

64557..65795
DNA (1239bp) protein (413aa)
pepT; peptidase T (EC:3.4.11.4)
Peptidase T {ECO:0000255|HAMAP-Rule:MF_00550}; EC=3.4.11.4 {ECO:0000255|HAMAP-Rule:MF_00550};; Aminotripeptidase {ECO:0000255|HAMAP-Rule:MF_00550}; Short=Tripeptidase {ECO:0000255|HAMAP-Rule:MF_00550}
Peptidase T {ECO:0000255|HAMAP-Rule:MF_00550}; EC=3.4.11.4 {ECO:0000255|HAMAP-Rule:MF_00550};; Aminotripeptidase {ECO:0000255|HAMAP-Rule:MF_00550}; Short=Tripeptidase {ECO:0000255|HAMAP-Rule:MF_00550}
NECEvent2014_6_4_scaffold_50_64

Not on your lists

comp(65886..67151)
DNA (1266bp) protein (422aa)
glycerate kinase family protein (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:ETJ18286.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Glycerate kinase {ECO:0000313|EMBL:ETJ18286.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_50_65
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(67287..67607)
DNA (321bp) protein (107aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53806.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Uncharacterized protein {ECO:0000313|EMBL:AAW53806.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_6_4_scaffold_50_66
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(67756..68646)
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:ESV19039.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Uncharacterized protein {ECO:0000313|EMBL:ESV19039.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
putative lipoprotein
NECEvent2014_6_4_scaffold_50_67
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

68763..69290
DNA (528bp) protein (176aa)
grpB family protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAW53804.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Uncharacterized protein {ECO:0000313|EMBL:AAW53804.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_6_4_scaffold_50_68
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

69407..70339
DNA (933bp) protein (311aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase rbh
NECEvent2014_6_4_scaffold_50_69
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

70361..70675
DNA (315bp) protein (105aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53793.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Uncharacterized protein {ECO:0000313|EMBL:AAW53793.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_6_4_scaffold_50_70
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(70826..71245)
DNA (420bp) protein (140aa)
Iron compound ABC uptake transporter substrate-binding protein
Transferrin receptor {ECO:0000313|EMBL:AAW53792.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Transferrin receptor {ECO:0000313|EMBL:AAW53792.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_6_4_scaffold_50_71
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(71314..71868)
DNA (555bp) protein (185aa)
transferrin receptor
Transferrin receptor {ECO:0000313|EMBL:AAW53792.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Transferrin receptor {ECO:0000313|EMBL:AAW53792.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_6_4_scaffold_50_72
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(71947..72726)
DNA (780bp) protein (260aa)
iron ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58037.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58037.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey
NECEvent2014_6_4_scaffold_50_73
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(72723..73682)
DNA (960bp) protein (320aa)
ferrichrome ABC transporter permease
Iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ12868.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source
Iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ12868.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source
NECEvent2014_6_4_scaffold_50_74
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(73666..74640)
DNA (975bp) protein (325aa)
fecCD transport family protein
Iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ12869.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source
Iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ12869.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source
NECEvent2014_6_4_scaffold_50_75
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(74732..74914)
DNA (183bp) protein (61aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58034.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE58034.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_50_76
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(74889..75857)
DNA (969bp) protein (323aa)
Ribonucleotide reductase of class Ib (aerobic),beta subunit (EC:1.17.4.1)
Uncharacterized protein {ECO:0000313|EMBL:ETJ12871.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Uncharacterized protein {ECO:0000313|EMBL:ETJ12871.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_6_4_scaffold_50_77
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(75976..78081)
DNA (2106bp) protein (702aa)
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;"
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;"
NECEvent2014_6_4_scaffold_50_78
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(78044..78442)
DNA (399bp) protein (133aa)
Ribonucleotide reduction protein NrdI
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_6_4_scaffold_50_79
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

79196..80071
DNA (876bp) protein (292aa)
Integral membrane domain protein
Membrane protein, putative {ECO:0000313|EMBL:AAW53775.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP6
Membrane protein, putative {ECO:0000313|EMBL:AAW53775.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP6
NECEvent2014_6_4_scaffold_50_80
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

80085..80585
DNA (501bp) protein (167aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
7-cyano-7-deazaguanine reductase
NECEvent2014_6_4_scaffold_50_81
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

80869..82374
DNA (1506bp) protein (502aa)
Di/tripeptide permease YjdL
Di-tripeptide transporter, putative {ECO:0000313|EMBL:AAW53772.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35
Di-tripeptide transporter, putative {ECO:0000313|EMBL:AAW53772.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35
NECEvent2014_6_4_scaffold_50_82
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

82658..82819
DNA (162bp) protein (54aa)
hypothetical protein
IS1272, transposase {ECO:0000313|EMBL:EFE58027.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
IS1272, transposase {ECO:0000313|EMBL:EFE58027.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_50_83
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

83029..83952
DNA (924bp) protein (308aa)
Putative lipid kinase SERP0390; EC=2.7.1.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative lipid kinase SERP0390; EC=2.7.1.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Transcription regulator [contains diacylglycerol kinase catalytic domain]
NECEvent2014_6_4_scaffold_50_84

Not on your lists

84351..86960
DNA (2610bp) protein (870aa)
aldehyde dehydrogenase family protein rbh
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase {ECO:0000313|EMBL:ETJ19871.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase {ECO:0000313|EMBL:ETJ19871.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_50_85
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(87027..87566)
DNA (540bp) protein (180aa)
Putative 5'(3')-deoxyribonucleotidase; EC=3.1.3.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative 5'(3')-deoxyribonucleotidase; EC=3.1.3.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
hypothetical protein
NECEvent2014_6_4_scaffold_50_86

Not on your lists

comp(87689..88810)
DNA (1122bp) protein (374aa)
Biosynthetic Aromatic amino acid aminotransferase beta (EC:2.6.1.57)
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:ETJ19869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:ETJ19869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_50_87

Not on your lists

comp(88947..90461)
DNA (1515bp) protein (505aa)
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:ETJ19868.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Uncharacterized protein {ECO:0000313|EMBL:ETJ19868.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_50_88

Not on your lists

comp(90454..91428)
DNA (975bp) protein (325aa)
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETJ19867.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut meta
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETJ19867.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut meta
ABC transporter ATP-binding protein
NECEvent2014_6_4_scaffold_50_89
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(91628..93406)
DNA (1779bp) protein (593aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AAW53765.1}; EC=3.6.1.- {ECO:0000313|EMBL:AAW53765.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AAW53765.1}; EC=3.6.1.- {ECO:0000313|EMBL:AAW53765.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
ATP-dependent DNA helicase RecQ
Displaying items 61-90 of 92 in total

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