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NECEvent2014_6_4_scaffold_576_4

Organism: NECEvent2014_6_4_Clostridiales_7_2_43FAA-rel_27_10_partial

partial RP 4 / 55 BSCG 2 / 51 ASCG 0 / 38
Location: 5113..5349

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 160
  • Evalue 1.40e-36
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 160
  • Evalue 1.40e-36
hfq; RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 76.0
  • Bit_score: 134
  • Evalue 1.20e-29

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 237
ATGGTGAATAAGCAACCAAACAATTTACAAGATATATTTTTAAATGGAGCAAGAAAAAATAAGATTTCCGTTATTATATACTTAACTAATGGATTTCAACTAAAAGGGTATGTAAAAGGATTTGACAGTTTTACAGTTGTACTTGATAGCGATGGTAAGCAAATGTTAGTTTACAAGCATGCAATAACAACTATAACACCAGCAAAACCAATTTTATTTAATAATGATGAAGAGTAG
PROTEIN sequence
Length: 79
MVNKQPNNLQDIFLNGARKNKISVIIYLTNGFQLKGYVKGFDSFTVVLDSDGKQMLVYKHAITTITPAKPILFNNDEE*