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NECEvent2014_6_4_Enterobacter_cloacae_rel_55_175_partial

NECEvent2014_6_4_Enterobacter_cloacae_56_158
In projects: NECEvent2014_6_4

Consensus taxonomy: Enterobacter cloacae  →  Enterobacter  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

May be slightly distinct from E. clo complex genotypes by gyrA in 174, 175, 176

Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
NECEvent2014_6_4_scaffold_1
176_004_scaffold_1
Species: Enterobacter cloacae (57.01%)
335 292628 bp 55.50 127.40 89.70
NECEvent2014_6_4_scaffold_29
176_004_scaffold_29
Species: Enterobacter cloacae (65.12%)
215 233800 bp 55.56 122.94 89.81
NECEvent2014_6_4_scaffold_15
176_004_scaffold_15
Genus: Enterobacter (85.8%)
176 164902 bp 55.42 146.55 90.68
NECEvent2014_6_4_scaffold_10
176_004_scaffold_10
Species: Enterobacter cloacae (61.05%)
172 195265 bp 55.12 139.92 91.80
NECEvent2014_6_4_scaffold_37
176_004_scaffold_37
Species: Enterobacter cloacae (56.86%)
153 164104 bp 57.17 160.18 91.30
NECEvent2014_6_4_scaffold_19
176_004_scaffold_19
Species: Enterobacter cloacae (59.09%)
132 141238 bp 56.01 158.73 89.85
NECEvent2014_6_4_scaffold_56
176_004_scaffold_56
Genus: Enterobacter (93.89%)
131 127416 bp 54.47 170.04 87.68
NECEvent2014_6_4_scaffold_20
176_004_scaffold_20
Species: Enterobacter cloacae (51.16%)
129 136670 bp 56.98 184.37 89.62
NECEvent2014_6_4_scaffold_26
176_004_scaffold_26
Species: Enterobacter cloacae (59.2%)
125 124358 bp 57.99 149.38 91.25
NECEvent2014_6_4_scaffold_22
176_004_scaffold_22
Species: Enterobacter cloacae (67.48%)
123 135469 bp 56.12 122.83 90.39
NECEvent2014_6_4_scaffold_24
176_004_scaffold_24
Species: Enterobacter cloacae (61.02%)
118 127829 bp 56.64 143.38 90.24
NECEvent2014_6_4_scaffold_31
176_004_scaffold_31
Species: Enterobacter cloacae (56.9%)
116 120570 bp 57.30 186.26 91.45
NECEvent2014_6_4_scaffold_27
176_004_scaffold_27
Species: Enterobacter cloacae (66.36%)
107 121479 bp 58.04 148.37 92.88
NECEvent2014_6_4_scaffold_44
176_004_scaffold_44
Species: Enterobacter cloacae (51.43%)
105 102651 bp 53.73 128.99 85.77
NECEvent2014_6_4_scaffold_68
176_004_scaffold_68
Species: Enterobacter cloacae (50.49%)
103 103272 bp 54.28 135.93 87.32
NECEvent2014_6_4_scaffold_42
176_004_scaffold_42
Species: Enterobacter cloacae (56.84%)
95 103823 bp 55.98 131.29 89.76
NECEvent2014_6_4_scaffold_52
176_004_scaffold_52
Species: Enterobacter cloacae (56.67%)
90 94506 bp 55.61 192.66 91.15
NECEvent2014_6_4_scaffold_49
176_004_scaffold_49
Species: Enterobacter cloacae (55.06%)
89 97743 bp 54.15 201.45 90.60
NECEvent2014_6_4_scaffold_55
176_004_scaffold_55
Species: Enterobacter cloacae (59.3%)
86 93871 bp 55.95 199.47 89.29
NECEvent2014_6_4_scaffold_65
176_004_scaffold_65
Species: Enterobacter cloacae (54.22%)
83 84910 bp 56.45 191.88 90.25
NECEvent2014_6_4_scaffold_71
176_004_scaffold_71
Species: Enterobacter cloacae (62.5%)
80 84204 bp 57.32 176.83 89.69
NECEvent2014_6_4_scaffold_103
176_004_scaffold_103
Genus: Enterobacter (63.29%)
79 80379 bp 55.80 157.27 88.82
NECEvent2014_6_4_scaffold_145
176_004_scaffold_145
Species: Enterobacter cloacae (50%)
72 77995 bp 56.64 191.11 92.40
NECEvent2014_6_4_scaffold_110
176_004_scaffold_110
Species: Enterobacter cloacae (66.67%)
69 62558 bp 57.10 171.14 91.87
NECEvent2014_6_4_scaffold_101
176_004_scaffold_101
Species: Enterobacter cloacae (66.67%)
63 64600 bp 54.98 133.74 89.71
NECEvent2014_6_4_scaffold_102
176_004_scaffold_102
Genus: Enterobacter (76.19%)
63 64329 bp 53.89 167.21 88.53
NECEvent2014_6_4_scaffold_115
176_004_scaffold_115
Genus: Enterobacter (96.77%)
62 60687 bp 55.77 147.61 88.75
NECEvent2014_6_4_scaffold_116
176_004_scaffold_116
Genus: Enterobacter (100%)
57 60525 bp 56.44 133.30 92.38
NECEvent2014_6_4_scaffold_112
176_004_scaffold_112
Species: Enterobacter cloacae (57.14%)
56 62000 bp 55.83 171.45 93.67
NECEvent2014_6_4_scaffold_135
176_004_scaffold_135
Species: Enterobacter cloacae (56%)
50 52104 bp 55.03 185.11 91.17
NECEvent2014_6_4_scaffold_140
176_004_scaffold_140
Species: Enterobacter cloacae (72.92%)
48 49625 bp 56.22 173.16 93.25
NECEvent2014_6_4_scaffold_152
176_004_scaffold_152
Species: Enterobacter cloacae (72.34%)
47 46773 bp 57.14 131.81 89.53
NECEvent2014_6_4_scaffold_124
176_004_scaffold_124
Species: Enterobacter cloacae (60.87%)
46 56352 bp 56.30 172.83 91.40
NECEvent2014_6_4_scaffold_129
176_004_scaffold_129
Species: Enterobacter cloacae (65.91%)
44 54074 bp 55.45 154.25 88.95
NECEvent2014_6_4_scaffold_212
176_004_scaffold_212
Genus: Enterobacter (93.02%)
43 41694 bp 56.72 179.64 92.10
NECEvent2014_6_4_scaffold_175
176_004_scaffold_175
Species: Enterobacter cloacae (78.05%)
41 42540 bp 57.95 144.07 93.06
NECEvent2014_6_4_scaffold_136
176_004_scaffold_136
Species: Enterobacter cloacae (64.1%)
39 51850 bp 54.50 190.44 92.26
NECEvent2014_6_4_scaffold_153
176_004_scaffold_153
Species: Enterobacter cloacae (57.89%)
38 46551 bp 55.99 170.01 93.42
NECEvent2014_6_4_scaffold_220
176_004_scaffold_220
Genus: Enterobacter (86.49%)
37 33894 bp 55.87 183.54 91.32
NECEvent2014_6_4_scaffold_250
176_004_scaffold_250
Species: Enterobacter cloacae (62.16%)
37 33522 bp 53.66 150.07 86.21
NECEvent2014_6_4_scaffold_186
176_004_scaffold_186
Species: Enterobacter cloacae (59.46%)
37 40136 bp 56.00 154.17 90.94
NECEvent2014_6_4_scaffold_200
176_004_scaffold_200
Species: Enterobacter cloacae (82.86%)
35 38390 bp 56.48 159.45 88.45
NECEvent2014_6_4_scaffold_281
176_004_scaffold_281
Genus: Enterobacter (82.35%)
34 26667 bp 54.86 149.08 90.64
NECEvent2014_6_4_scaffold_164
176_004_scaffold_164
Species: Enterobacter cloacae (67.65%)
34 44343 bp 58.11 143.96 95.43
NECEvent2014_6_4_scaffold_211
176_004_scaffold_211
Genus: Enterobacter (96.88%)
32 35370 bp 55.43 182.62 89.42
NECEvent2014_6_4_scaffold_304
176_004_scaffold_304
Species: Enterobacter cloacae (65.63%)
32 27243 bp 53.03 136.49 84.81
NECEvent2014_6_4_scaffold_323
176_004_scaffold_323
Genus: Enterobacter (56.67%)
30 22800 bp 53.58 172.58 88.89
NECEvent2014_6_4_scaffold_232
176_004_scaffold_232
Species: Enterobacter cloacae (57.69%)
26 31636 bp 59.00 170.64 89.62
NECEvent2014_6_4_scaffold_289
176_004_scaffold_289
Species: Enterobacter cloacae (72%)
25 25606 bp 56.87 136.68 90.76
NECEvent2014_6_4_scaffold_282
176_004_scaffold_282
Species: Enterobacter cloacae (79.17%)
24 26633 bp 58.97 125.25 91.98
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.