ggKbase home page

NECEvent2014_6_5_scaffold_546_27

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 13524..13889

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 121.0
  • Bit_score: 223
  • Evalue 1.20e-55
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 121.0
  • Bit_score: 216
  • Evalue 5.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:221 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCAAGAATAGCAGGTATTGACCTACCAAGAGAAAAAAGAGTTGAAATAGGTCTAACATATATATTCGGAATTGGTTTAGCAACATCTCAAAAGATTTTAGCTGAAACTGGAATAAATCCGGATACAAGAGTTAAAGATTTAACTGAAGATGAAGTTAATGCAATTAGAACATTTATAAAAGAAATGAATGTTGAAGGTGATTTAAGAAGAGAAGTTGCTTTAAACATTAAGAGATTACAAGAAATCGGATGCTACAGAGGAATTAGACATAGAAAAGGTCTTCCAGTTAGAGGACAAAAAACTAAGACTAATGCGAGAACAAGAAAAGGTCCTAAGAAGACTATCGCTAATAAGAAGAAGTAA
PROTEIN sequence
Length: 122
MARIAGIDLPREKRVEIGLTYIFGIGLATSQKILAETGINPDTRVKDLTEDEVNAIRTFIKEMNVEGDLRREVALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTIANKKK*