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NECEvent2014_6_5_scaffold_546_30

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 15051..15998

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 315.0
  • Bit_score: 583
  • Evalue 1.60e-163
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 315.0
  • Bit_score: 581
  • Evalue 2.00e-163

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Taxonomy

Clostridium intestinale → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGTTAGAGATTGAAAAGCCAATAATTGAGTGTGTAGAATCAAACGAAGATGGTACTTACGGTAAATACGTAGTAGAACCACTTGAAAGAGGATACGGAATTACTTTAGGTAATGCTCTTAGAAGAATTTTATTATCATCTTTACCAGGTGCTGCAACAACATCAGTTAAAATTGATGGAGTTCTTCATGAGTTCTCAACAGTTACTGGAGTTAAAGAGGATGTTACAGAATTAATTCTTAACATTAAAGCTTTAGCTTTGAGAATGAATGGTGAAGGTCAAAAGACAATTTATATAGATGCAAAAGGTCCTGGGGTTGTAACAGGAGCAGATATAAAGACTGACGGTGATGTAGAGGTTGTTAATAAGGATTTACATATTGCAACGCTTGATGAAAACGGAAGACTTTATATGGAACTAACAGTAAACAAAGGTAGAGGATATGTTACTCAAAATAAAAATAAGAGTGAAGATTTACCAATATCCGCTATTGCTGTAGACTCAATATACACACCAGTTAAGAGAGTTAACTTTACAGTTGAAAATACTAGAGTTGGTCAAATTACTGACTATGATAAGTTAACTTTAGAAATCTGGACTAATGGTACAATTAAGATTGATGAGGCTATAAGCTTATCAGCTAAAATTCTTATAGAACATTTCAAGTTATTCATGTCATTAACTGACAATACGAATGATGTTGAAATTATGATAGAAAAAGAAGAAGATAAAAAAGAGAAAGTACTAGAGATGACTGTAGAAGAGCTAGATTTATCAGTTAGATCTTATAACTGTTTAAAGAGAGCTGGAATTAATACAGTTCAAGAACTTGCATCAAAGTCAATGGATGATATGATGAAAGTAAGAAATTTAGGAAAGAAATCTCTTGAAGAAGTTGAAAGAAAATTAAAAGAACTAGGCTTAGGTTTAAGACTAAACGATGAGTAA
PROTEIN sequence
Length: 316
MLEIEKPIIECVESNEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGAATTSVKIDGVLHEFSTVTGVKEDVTELILNIKALALRMNGEGQKTIYIDAKGPGVVTGADIKTDGDVEVVNKDLHIATLDENGRLYMELTVNKGRGYVTQNKNKSEDLPISAIAVDSIYTPVKRVNFTVENTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHFKLFMSLTDNTNDVEIMIEKEEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELASKSMDDMMKVRNLGKKSLEEVERKLKELGLGLRLNDE*