ggKbase home page

NECEvent2014_6_5_scaffold_670_15

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 13897..14298

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEV01078.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinali similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 126.0
  • Bit_score: 104
  • Evalue 1.50e-19
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 122.0
  • Bit_score: 102
  • Evalue 1.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia intestinalis → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 402
GTGAAAATAATTTTAGATTATACAAGTGATTTGCCGATGTATGAACAAGTAGTAAAAGGAATAAAGGATTTAATTATAGATGGTAGTCTAAAGGAAAACGATTTACTACCTTCTGTTAGGAAGCTATCTCAGGAGCTTAATGTTAGTACTATTACTATAAAAAGGGCTTATTTAGAATTAGAGAAGGCCGGAATAACATATTCTGTTTCGGGGGTAGGCACCTTTGTGAGAGTTAAGGATAATGAAGAATTAATTAATGAAAATAAAGAAAAGTTATTTTGTGAACTTGATGATATAGTAGGGAAATTATTAGATGGTAAGTGTACAAAAGAAGAGATAATTAAAAGGGTTAATAAGATTTTGAGGGGGAATTGAAATTATGGAGAATTTATTAGAGATTAA
PROTEIN sequence
Length: 134
VKIILDYTSDLPMYEQVVKGIKDLIIDGSLKENDLLPSVRKLSQELNVSTITIKRAYLELEKAGITYSVSGVGTFVRVKDNEELINENKEKLFCELDDIVGKLLDGKCTKEEIIKRVNKILRGN*NYGEFIRD*