ggKbase home page

NECEvent2014_6_5_scaffold_1821_3

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1278..1712)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 144.0
  • Bit_score: 278
  • Evalue 6.40e-72
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 144.0
  • Bit_score: 275
  • Evalue 6.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 435
ATGAAATCATACATTGCGAAAGCACAAGAAGTTGAAAGAAAATGGTATGTTGTAGATGCAGCTGGAAAGCCACTAGGAAGAGTAGCAAGCCAAGTTGCTTCAATATTAAGAGGAAAGAATAAGCCAACATTTACTCCAAATGTTGACTGCGGAGATTTCGTTATCGTTATTAATGCAGAAAAGGTTGTTTTAACTGGTAAGAAGTTAGATCAAAAATTAATGAGAAAGCACAGCCTATATCCAGGCGGATTAAAGGAAACTCCATATAGAGAAGTACTAGATAAGAAACCTGAATTCGCTTTTGAAGAAGCAGTTAGAAGAATGCTTCCAAGTGGTGTTTTAGGAAGAAAGATGCTAACTAAGTTAAAAGTATATAGAGGCGCTGAACACAATCATTCAGCTCAAAAACCAGAAGTGCTTGAATTAAAGTACTAA
PROTEIN sequence
Length: 145
MKSYIAKAQEVERKWYVVDAAGKPLGRVASQVASILRGKNKPTFTPNVDCGDFVIVINAEKVVLTGKKLDQKLMRKHSLYPGGLKETPYREVLDKKPEFAFEEAVRRMLPSGVLGRKMLTKLKVYRGAEHNHSAQKPEVLELKY*