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NECEvent2014_6_5_scaffold_166_16

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 15298..15507

Top 3 Functional Annotations

Value Algorithm Source
cspE; transcription antiterminator and regulator of RNA stability similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 142
  • Evalue 4.00e-32
RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:END95579.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 142
  • Evalue 2.00e-31

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGATGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACCAATGGTTTTAAAACTCTGGCTGAAGGTCAGCGTGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA
PROTEIN sequence
Length: 70
MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL*