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NECEvent2014_6_5_scaffold_240_21

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(21880..23082)

Top 3 Functional Annotations

Value Algorithm Source
Assembly protein in type IV pilin biogenesis, transmembrane protein {ECO:0000313|EMBL:ETX72172.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 400.0
  • Bit_score: 792
  • Evalue 3.70e-226
type IV pilin biogenesis protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 400.0
  • Bit_score: 698
  • Evalue 8.50e-199

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGTCCGCTAAACAGCTTTGGCGCTGGCAAGGCATTAACAACAAAGGTAAATCGCTGGAAGGTACACTATGGGCCGATACCCGACCGTCATTAATGCTGGCTCTTGAGAAACAACAGATTACGCCGCTACGCATTAAGCGTATGCGTGTCAAAACCTCGCACTGGAGCCGTACAAGAAGTGCCGAAACCATACACCAGTTGGCGACATTGCTAAAAGCAGGGTTAACGCTCTCAGCAGGGCTAGCTCTGCTTGCTGAACAGCATCCCAGCAGTCAATGGCAGGCGCTACTGCGTACGCTGGCTTACGATATGGAACAGGGCATTACCCTCTCCACCTCACTATCACAATGGCAACACGTTTTTCCGCCCCTTTACCAGGCAATGATCCGCACCGGAGAGCTTACGGGTAAGCTGGACGACTGCTGTTTTGAACTCGCCTACCAGCAAAAGAAACAACAGCAACTTGCTGATAAAGTTAAAAAAGCCCTGCGTTATCCGCTTATCATCATCACAATGGCGGTGTTGGTCGTATTTGCGATGTTGCAGTTTGTACTCCCTGAGTTTGCCGCCATCTACCAGACATTCAACACCCCGCTACCGGCCCTCACTCAGTGGATTATTACCATCGCACACTATAGCAGCCAATGGGGATGGCTGGCGGTAGCACTTGGCCTGGTAGCGGTTGCGGCACATCATTTGATAAATCAGAAACCGTACTGGCTCGTTCTGCGCCAGAAATTGCTGCTCAGCCTCCCGGTCATAGGGCCGATGGTGAGAGGGCAAAAGCTCACGCAGATCTTCACCGTTCTGGCGTTAACGCAAAATGCGGGCATTCCCTTTTTGCAGGGTCTTGAGAGCGTTACCGAAACGCTGGCTAACCCTTTCTGGTCGCAGCGTTTAGCGCTGGTTCAGCACGACATTAGCGCCGGAAAGCCGGTCTGGTTAGCGCTTAAAAATAGCGGTGAATTTAGCCCATTGTGCATACAGCTGGTCCGAACTGGTGAAGCTTCCGGCTCGCTGGATGCAATGCTGCGCAATCTCGCGCATCACCATGGTGAGAAAACCCTGGCTCAAGCTGAGAATTTGGCTGCATTACTTGAGCCTGCGTTGCTGGTCATCACGGGGCTTATCATCGGTACGCTGGTTGTCGCGATGTATTTACCGATTTTCCATTTGGGAGATGCGATGAGCGGAGTGGGATAA
PROTEIN sequence
Length: 401
MSAKQLWRWQGINNKGKSLEGTLWADTRPSLMLALEKQQITPLRIKRMRVKTSHWSRTRSAETIHQLATLLKAGLTLSAGLALLAEQHPSSQWQALLRTLAYDMEQGITLSTSLSQWQHVFPPLYQAMIRTGELTGKLDDCCFELAYQQKKQQQLADKVKKALRYPLIIITMAVLVVFAMLQFVLPEFAAIYQTFNTPLPALTQWIITIAHYSSQWGWLAVALGLVAVAAHHLINQKPYWLVLRQKLLLSLPVIGPMVRGQKLTQIFTVLALTQNAGIPFLQGLESVTETLANPFWSQRLALVQHDISAGKPVWLALKNSGEFSPLCIQLVRTGEASGSLDAMLRNLAHHHGEKTLAQAENLAALLEPALLVITGLIIGTLVVAMYLPIFHLGDAMSGVG*